Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.09■■□□□ 1.13
Pdlim1O70400 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pdlim1O70400 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pdlim1O70400 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Pdlim1O70400 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pdlim1O70400 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pdlim1O70400 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.07■■□□□ 1.12
Pdlim1O70400 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pdlim1O70400 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.06■■□□□ 1.12
Pdlim1O70400 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pdlim1O70400 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pdlim1O70400 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pdlim1O70400 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pdlim1O70400 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.05■■□□□ 1.12
Pdlim1O70400 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pdlim1O70400 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pdlim1O70400 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Pdlim1O70400 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pdlim1O70400 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pdlim1O70400 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pdlim1O70400 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pdlim1O70400 Gm14523-201ENSMUST00000117260 558 ntBASIC22.04■■□□□ 1.12
Pdlim1O70400 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.04■■□□□ 1.12
Pdlim1O70400 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pdlim1O70400 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pdlim1O70400 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pdlim1O70400 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pdlim1O70400 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Pdlim1O70400 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.03■■□□□ 1.12
Pdlim1O70400 Gm12366-201ENSMUST00000121722 873 ntBASIC22.03■■□□□ 1.12
Pdlim1O70400 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.03■■□□□ 1.12
Pdlim1O70400 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.03■■□□□ 1.12
Pdlim1O70400 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pdlim1O70400 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.03■■□□□ 1.12
Pdlim1O70400 Gm5786-201ENSMUST00000085368 882 ntBASIC22.03■■□□□ 1.12
Pdlim1O70400 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Pdlim1O70400 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Pdlim1O70400 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pdlim1O70400 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pdlim1O70400 Gm27502-201ENSMUST00000183495 199 ntBASIC22.02■■□□□ 1.12
Pdlim1O70400 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Pdlim1O70400 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Pdlim1O70400 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.01■■□□□ 1.11
Pdlim1O70400 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.01■■□□□ 1.11
Pdlim1O70400 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pdlim1O70400 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pdlim1O70400 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Pdlim1O70400 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Pdlim1O70400 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Pdlim1O70400 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22■■□□□ 1.11
Pdlim1O70400 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pdlim1O70400 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pdlim1O70400 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pdlim1O70400 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pdlim1O70400 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pdlim1O70400 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pdlim1O70400 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Pdlim1O70400 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pdlim1O70400 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pdlim1O70400 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pdlim1O70400 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pdlim1O70400 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pdlim1O70400 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pdlim1O70400 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pdlim1O70400 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pdlim1O70400 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pdlim1O70400 Gm7332-201ENSMUST00000118351 454 ntBASIC21.97■■□□□ 1.11
Pdlim1O70400 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Pdlim1O70400 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pdlim1O70400 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.96■■□□□ 1.11
Pdlim1O70400 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pdlim1O70400 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pdlim1O70400 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pdlim1O70400 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
Pdlim1O70400 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pdlim1O70400 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pdlim1O70400 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Pdlim1O70400 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pdlim1O70400 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pdlim1O70400 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pdlim1O70400 Cap2-205ENSMUST00000225824 1634 ntBASIC21.94■■□□□ 1.1
Pdlim1O70400 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.93■■□□□ 1.1
Pdlim1O70400 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pdlim1O70400 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pdlim1O70400 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.93■■□□□ 1.1
Pdlim1O70400 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.93■■□□□ 1.1
Pdlim1O70400 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Pdlim1O70400 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.93■■□□□ 1.1
Pdlim1O70400 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pdlim1O70400 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pdlim1O70400 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pdlim1O70400 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Pdlim1O70400 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pdlim1O70400 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.92■■□□□ 1.1
Pdlim1O70400 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pdlim1O70400 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pdlim1O70400 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pdlim1O70400 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pdlim1O70400 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pdlim1O70400 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms