Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6dO55057 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6dO55057 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6dO55057 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6dO55057 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6dO55057 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6dO55057 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6dO55057 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6dO55057 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.63■□□□□ 0.41
Pde6dO55057 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6dO55057 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6dO55057 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6dO55057 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Pde6dO55057 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.62■□□□□ 0.41
Pde6dO55057 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pde6dO55057 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6dO55057 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.61■□□□□ 0.41
Pde6dO55057 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6dO55057 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6dO55057 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6dO55057 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6dO55057 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6dO55057 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pde6dO55057 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6dO55057 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6dO55057 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6dO55057 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6dO55057 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pde6dO55057 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pde6dO55057 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.58■□□□□ 0.41
Pde6dO55057 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Pde6dO55057 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pde6dO55057 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6dO55057 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pde6dO55057 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.57■□□□□ 0.4
Pde6dO55057 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.57■□□□□ 0.4
Pde6dO55057 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6dO55057 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6dO55057 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pde6dO55057 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6dO55057 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pde6dO55057 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6dO55057 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6dO55057 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6dO55057 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6dO55057 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6dO55057 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pde6dO55057 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pde6dO55057 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pde6dO55057 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6dO55057 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6dO55057 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pde6dO55057 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pde6dO55057 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6dO55057 Gm16148-201ENSMUST00000119653 893 ntBASIC17.54■□□□□ 0.4
Pde6dO55057 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pde6dO55057 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.54■□□□□ 0.4
Pde6dO55057 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6dO55057 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Pde6dO55057 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pde6dO55057 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6dO55057 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pde6dO55057 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6dO55057 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6dO55057 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6dO55057 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Pde6dO55057 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Pde6dO55057 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pde6dO55057 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pde6dO55057 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pde6dO55057 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pde6dO55057 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6dO55057 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6dO55057 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pde6dO55057 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pde6dO55057 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Pde6dO55057 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pde6dO55057 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pde6dO55057 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Pde6dO55057 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Pde6dO55057 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6dO55057 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.51■□□□□ 0.39
Pde6dO55057 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6dO55057 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pde6dO55057 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pde6dO55057 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Pde6dO55057 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6dO55057 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6dO55057 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6dO55057 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6dO55057 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6dO55057 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6dO55057 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6dO55057 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6dO55057 Gm30023-201ENSMUST00000197970 889 ntBASIC17.49■□□□□ 0.39
Pde6dO55057 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.49■□□□□ 0.39
Pde6dO55057 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pde6dO55057 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pde6dO55057 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.48■□□□□ 0.39
Pde6dO55057 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms