Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DffbO54788 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.06■□□□□ 0.64
DffbO54788 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DffbO54788 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DffbO54788 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
DffbO54788 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DffbO54788 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DffbO54788 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DffbO54788 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
DffbO54788 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DffbO54788 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
DffbO54788 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.04■□□□□ 0.64
DffbO54788 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.03■□□□□ 0.64
DffbO54788 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DffbO54788 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.03■□□□□ 0.64
DffbO54788 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
DffbO54788 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DffbO54788 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DffbO54788 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DffbO54788 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
DffbO54788 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
DffbO54788 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
DffbO54788 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
DffbO54788 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
DffbO54788 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DffbO54788 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
DffbO54788 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.01■□□□□ 0.63
DffbO54788 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DffbO54788 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
DffbO54788 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19■□□□□ 0.63
DffbO54788 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
DffbO54788 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
DffbO54788 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19■□□□□ 0.63
DffbO54788 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DffbO54788 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DffbO54788 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DffbO54788 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DffbO54788 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
DffbO54788 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DffbO54788 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DffbO54788 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DffbO54788 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
DffbO54788 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.98■□□□□ 0.63
DffbO54788 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
DffbO54788 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DffbO54788 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
DffbO54788 Gm6821-201ENSMUST00000107540 542 ntBASIC18.97■□□□□ 0.63
DffbO54788 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DffbO54788 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
DffbO54788 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
DffbO54788 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DffbO54788 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
DffbO54788 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DffbO54788 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
DffbO54788 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DffbO54788 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
DffbO54788 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.94■□□□□ 0.62
DffbO54788 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
DffbO54788 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
DffbO54788 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
DffbO54788 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
DffbO54788 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DffbO54788 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.93■□□□□ 0.62
DffbO54788 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DffbO54788 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DffbO54788 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DffbO54788 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DffbO54788 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DffbO54788 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
DffbO54788 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.92■□□□□ 0.62
DffbO54788 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
DffbO54788 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
DffbO54788 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DffbO54788 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
DffbO54788 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.9■□□□□ 0.62
DffbO54788 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
DffbO54788 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DffbO54788 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
DffbO54788 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.89■□□□□ 0.62
DffbO54788 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
DffbO54788 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DffbO54788 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DffbO54788 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DffbO54788 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.89■□□□□ 0.61
DffbO54788 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DffbO54788 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
DffbO54788 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DffbO54788 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DffbO54788 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DffbO54788 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.88■□□□□ 0.61
DffbO54788 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DffbO54788 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.88■□□□□ 0.61
DffbO54788 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
DffbO54788 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DffbO54788 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DffbO54788 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DffbO54788 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.87■□□□□ 0.61
DffbO54788 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DffbO54788 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DffbO54788 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms