Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC010864.1-201ENST00000609407 1511 ntBASIC29.52■■■□□ 2.32
FOXN1O15353 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
FOXN1O15353 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
FOXN1O15353 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
FOXN1O15353 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC29.52■■■□□ 2.32
FOXN1O15353 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
FOXN1O15353 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
FOXN1O15353 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
FOXN1O15353 RNF146-205ENST00000477776 762 ntTSL 3 BASIC29.51■■■□□ 2.31
FOXN1O15353 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
FOXN1O15353 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
FOXN1O15353 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
FOXN1O15353 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC29.5■■■□□ 2.31
FOXN1O15353 CREM-229ENST00000474362 1030 ntTSL 2 BASIC29.5■■■□□ 2.31
FOXN1O15353 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
FOXN1O15353 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC29.5■■■□□ 2.31
FOXN1O15353 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
FOXN1O15353 AL139393.2-201ENST00000608721 2025 ntBASIC29.49■■■□□ 2.31
FOXN1O15353 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
FOXN1O15353 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC29.49■■■□□ 2.31
FOXN1O15353 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
FOXN1O15353 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
FOXN1O15353 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
FOXN1O15353 NALT1-201ENST00000429224 738 ntTSL 5 BASIC29.48■■■□□ 2.31
FOXN1O15353 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC29.48■■■□□ 2.31
FOXN1O15353 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
FOXN1O15353 HYI-210ENST00000486909 905 ntTSL 5 BASIC29.47■■■□□ 2.31
FOXN1O15353 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC29.47■■■□□ 2.31
FOXN1O15353 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
FOXN1O15353 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC29.46■■■□□ 2.31
FOXN1O15353 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.46■■■□□ 2.31
FOXN1O15353 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC29.46■■■□□ 2.31
FOXN1O15353 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC29.46■■■□□ 2.31
FOXN1O15353 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC29.45■■■□□ 2.31
FOXN1O15353 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
FOXN1O15353 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
FOXN1O15353 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC29.45■■■□□ 2.31
FOXN1O15353 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
FOXN1O15353 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
FOXN1O15353 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
FOXN1O15353 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
FOXN1O15353 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
FOXN1O15353 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
FOXN1O15353 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
FOXN1O15353 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
FOXN1O15353 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
FOXN1O15353 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC29.44■■■□□ 2.3
FOXN1O15353 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
FOXN1O15353 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
FOXN1O15353 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC29.43■■■□□ 2.3
FOXN1O15353 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC29.43■■■□□ 2.3
FOXN1O15353 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
FOXN1O15353 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
FOXN1O15353 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
FOXN1O15353 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC29.42■■■□□ 2.3
FOXN1O15353 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC29.42■■■□□ 2.3
FOXN1O15353 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
FOXN1O15353 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
FOXN1O15353 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
FOXN1O15353 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
FOXN1O15353 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
FOXN1O15353 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
FOXN1O15353 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC29.41■■■□□ 2.3
FOXN1O15353 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
FOXN1O15353 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC29.4■■■□□ 2.3
FOXN1O15353 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
FOXN1O15353 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
FOXN1O15353 IDNK-201ENST00000376417 511 ntTSL 5 BASIC29.39■■■□□ 2.3
FOXN1O15353 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
FOXN1O15353 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
FOXN1O15353 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
FOXN1O15353 PEX7-203ENST00000541292 945 ntTSL 5 BASIC29.39■■■□□ 2.3
FOXN1O15353 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC29.39■■■□□ 2.3
FOXN1O15353 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
FOXN1O15353 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
FOXN1O15353 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
FOXN1O15353 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC29.37■■■□□ 2.29
FOXN1O15353 RAP2CP1-202ENST00000605179 643 ntBASIC29.37■■■□□ 2.29
FOXN1O15353 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
FOXN1O15353 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
FOXN1O15353 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC29.36■■■□□ 2.29
FOXN1O15353 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC29.36■■■□□ 2.29
FOXN1O15353 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
FOXN1O15353 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
FOXN1O15353 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
FOXN1O15353 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
FOXN1O15353 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC29.35■■■□□ 2.29
FOXN1O15353 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
FOXN1O15353 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
FOXN1O15353 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
FOXN1O15353 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
FOXN1O15353 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC29.34■■■□□ 2.29
FOXN1O15353 Z92544.1-202ENST00000571933 1220 ntBASIC29.34■■■□□ 2.29
FOXN1O15353 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
FOXN1O15353 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
FOXN1O15353 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
FOXN1O15353 AC093536.1-201ENST00000569153 554 ntBASIC29.33■■■□□ 2.29
FOXN1O15353 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
FOXN1O15353 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
FOXN1O15353 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms