Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.49■■□□□ 1.83
TRANK1O15050 AC019171.1-201ENST00000601251 1056 ntBASIC26.49■■□□□ 1.83
TRANK1O15050 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRANK1O15050 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRANK1O15050 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRANK1O15050 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRANK1O15050 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.48■■□□□ 1.83
TRANK1O15050 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRANK1O15050 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.48■■□□□ 1.83
TRANK1O15050 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.47■■□□□ 1.83
TRANK1O15050 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
TRANK1O15050 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
TRANK1O15050 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TRANK1O15050 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.47■■□□□ 1.83
TRANK1O15050 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TRANK1O15050 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TRANK1O15050 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
TRANK1O15050 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.45■■□□□ 1.83
TRANK1O15050 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
TRANK1O15050 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TRANK1O15050 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
TRANK1O15050 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TRANK1O15050 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.44■■□□□ 1.82
TRANK1O15050 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
TRANK1O15050 ST7-AS1-201ENST00000456775 1889 ntBASIC26.43■■□□□ 1.82
TRANK1O15050 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.43■■□□□ 1.82
TRANK1O15050 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TRANK1O15050 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.43■■□□□ 1.82
TRANK1O15050 AC018755.3-202ENST00000596210 929 ntBASIC26.43■■□□□ 1.82
TRANK1O15050 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.43■■□□□ 1.82
TRANK1O15050 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TRANK1O15050 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
TRANK1O15050 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.42■■□□□ 1.82
TRANK1O15050 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.41■■□□□ 1.82
TRANK1O15050 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
TRANK1O15050 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TRANK1O15050 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TRANK1O15050 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TRANK1O15050 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TRANK1O15050 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
TRANK1O15050 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.4■■□□□ 1.82
TRANK1O15050 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TRANK1O15050 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.39■■□□□ 1.82
TRANK1O15050 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.39■■□□□ 1.82
TRANK1O15050 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.39■■□□□ 1.81
TRANK1O15050 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.81
TRANK1O15050 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRANK1O15050 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.38■■□□□ 1.81
TRANK1O15050 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRANK1O15050 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TRANK1O15050 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
TRANK1O15050 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRANK1O15050 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRANK1O15050 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TRANK1O15050 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRANK1O15050 AP004833.2-201ENST00000532228 1454 ntBASIC26.36■■□□□ 1.81
TRANK1O15050 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TRANK1O15050 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TRANK1O15050 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
TRANK1O15050 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRANK1O15050 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.35■■□□□ 1.81
TRANK1O15050 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.34■■□□□ 1.81
TRANK1O15050 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.34■■□□□ 1.81
TRANK1O15050 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRANK1O15050 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
TRANK1O15050 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.32■■□□□ 1.8
TRANK1O15050 AC131281.2-201ENST00000520478 145 ntBASIC26.32■■□□□ 1.8
TRANK1O15050 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.32■■□□□ 1.8
TRANK1O15050 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
TRANK1O15050 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRANK1O15050 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.31■■□□□ 1.8
TRANK1O15050 MIR4787-201ENST00000607364 84 ntBASIC26.31■■□□□ 1.8
TRANK1O15050 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.31■■□□□ 1.8
TRANK1O15050 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRANK1O15050 AC022616.5-201ENST00000518796 181 ntBASIC26.3■■□□□ 1.8
TRANK1O15050 KRT125P-201ENST00000546827 989 ntBASIC26.3■■□□□ 1.8
TRANK1O15050 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRANK1O15050 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
TRANK1O15050 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRANK1O15050 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.29■■□□□ 1.8
TRANK1O15050 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TRANK1O15050 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.29■■□□□ 1.8
TRANK1O15050 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.29■■□□□ 1.8
TRANK1O15050 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.29■■□□□ 1.8
TRANK1O15050 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TRANK1O15050 UNC93B8-201ENST00000511903 705 ntBASIC26.28■■□□□ 1.8
TRANK1O15050 AC087393.1-201ENST00000582896 145 ntBASIC26.28■■□□□ 1.8
TRANK1O15050 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TRANK1O15050 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
TRANK1O15050 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.28■■□□□ 1.8
TRANK1O15050 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.28■■□□□ 1.8
TRANK1O15050 AL359504.2-201ENST00000605506 1601 ntBASIC26.27■■□□□ 1.8
TRANK1O15050 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRANK1O15050 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.27■■□□□ 1.8
TRANK1O15050 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRANK1O15050 ABCB10P3-201ENST00000561950 2166 ntBASIC26.27■■□□□ 1.8
TRANK1O15050 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRANK1O15050 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.26■■□□□ 1.79
TRANK1O15050 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
TRANK1O15050 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 242.4 ms