Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Raet1bO08603 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Raet1bO08603 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Raet1bO08603 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.73■□□□□ 0.75
Raet1bO08603 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Raet1bO08603 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.73■□□□□ 0.75
Raet1bO08603 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Raet1bO08603 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Raet1bO08603 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Raet1bO08603 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Raet1bO08603 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.72■□□□□ 0.75
Raet1bO08603 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Raet1bO08603 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Raet1bO08603 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Raet1bO08603 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Raet1bO08603 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Raet1bO08603 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Raet1bO08603 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Raet1bO08603 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Raet1bO08603 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.7■□□□□ 0.74
Raet1bO08603 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Raet1bO08603 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Raet1bO08603 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.69■□□□□ 0.74
Raet1bO08603 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Raet1bO08603 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Raet1bO08603 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Raet1bO08603 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Raet1bO08603 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Raet1bO08603 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Raet1bO08603 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Raet1bO08603 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Raet1bO08603 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Raet1bO08603 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Raet1bO08603 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.68■□□□□ 0.74
Raet1bO08603 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Raet1bO08603 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Raet1bO08603 Scarna2-201ENSMUST00000157560 414 ntBASIC19.67■□□□□ 0.74
Raet1bO08603 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Raet1bO08603 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Raet1bO08603 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Raet1bO08603 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.67■□□□□ 0.74
Raet1bO08603 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Raet1bO08603 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Raet1bO08603 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Raet1bO08603 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Raet1bO08603 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.65■□□□□ 0.74
Raet1bO08603 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Raet1bO08603 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Raet1bO08603 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Raet1bO08603 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Raet1bO08603 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Raet1bO08603 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Raet1bO08603 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Raet1bO08603 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.64■□□□□ 0.73
Raet1bO08603 Gm9806-201ENSMUST00000051080 552 ntBASIC19.64■□□□□ 0.73
Raet1bO08603 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Raet1bO08603 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Raet1bO08603 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Raet1bO08603 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.63■□□□□ 0.73
Raet1bO08603 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Raet1bO08603 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Raet1bO08603 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Raet1bO08603 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Raet1bO08603 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Raet1bO08603 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Raet1bO08603 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.62■□□□□ 0.73
Raet1bO08603 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Raet1bO08603 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Raet1bO08603 Gm16437-201ENSMUST00000025669 507 ntBASIC19.62■□□□□ 0.73
Raet1bO08603 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Raet1bO08603 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Raet1bO08603 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Raet1bO08603 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.62■□□□□ 0.73
Raet1bO08603 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Raet1bO08603 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.62■□□□□ 0.73
Raet1bO08603 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.61■□□□□ 0.73
Raet1bO08603 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Raet1bO08603 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Raet1bO08603 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Raet1bO08603 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Raet1bO08603 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Raet1bO08603 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Raet1bO08603 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Raet1bO08603 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Raet1bO08603 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Raet1bO08603 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Raet1bO08603 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Raet1bO08603 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.6■□□□□ 0.73
Raet1bO08603 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.6■□□□□ 0.73
Raet1bO08603 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Raet1bO08603 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Raet1bO08603 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Raet1bO08603 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Raet1bO08603 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Raet1bO08603 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Raet1bO08603 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Raet1bO08603 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Raet1bO08603 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Raet1bO08603 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Raet1bO08603 Gm11687-201ENSMUST00000118911 886 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms