Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.39■□□□□ 0.69
Cldn20G5E8X0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn20G5E8X0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn20G5E8X0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn20G5E8X0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cldn20G5E8X0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn20G5E8X0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn20G5E8X0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn20G5E8X0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn20G5E8X0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn20G5E8X0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn20G5E8X0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Cldn20G5E8X0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cldn20G5E8X0 Gm8503-201ENSMUST00000118131 455 ntBASIC19.36■□□□□ 0.69
Cldn20G5E8X0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn20G5E8X0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn20G5E8X0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Cldn20G5E8X0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cldn20G5E8X0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn20G5E8X0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn20G5E8X0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn20G5E8X0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.35■□□□□ 0.69
Cldn20G5E8X0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn20G5E8X0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn20G5E8X0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn20G5E8X0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Cldn20G5E8X0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn20G5E8X0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn20G5E8X0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn20G5E8X0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cldn20G5E8X0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cldn20G5E8X0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cldn20G5E8X0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.33■□□□□ 0.68
Cldn20G5E8X0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn20G5E8X0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn20G5E8X0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn20G5E8X0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn20G5E8X0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn20G5E8X0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.32■□□□□ 0.68
Cldn20G5E8X0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn20G5E8X0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn20G5E8X0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.32■□□□□ 0.68
Cldn20G5E8X0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.32■□□□□ 0.68
Cldn20G5E8X0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn20G5E8X0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn20G5E8X0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn20G5E8X0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn20G5E8X0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Cldn20G5E8X0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn20G5E8X0 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.3■□□□□ 0.68
Cldn20G5E8X0 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.3■□□□□ 0.68
Cldn20G5E8X0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn20G5E8X0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.3■□□□□ 0.68
Cldn20G5E8X0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn20G5E8X0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.29■□□□□ 0.68
Cldn20G5E8X0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cldn20G5E8X0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.28■□□□□ 0.68
Cldn20G5E8X0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn20G5E8X0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn20G5E8X0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.28■□□□□ 0.68
Cldn20G5E8X0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Cldn20G5E8X0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn20G5E8X0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn20G5E8X0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cldn20G5E8X0 Particl-201ENSMUST00000205370 1560 ntBASIC19.27■□□□□ 0.67
Cldn20G5E8X0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn20G5E8X0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn20G5E8X0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn20G5E8X0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn20G5E8X0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cldn20G5E8X0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn20G5E8X0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn20G5E8X0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn20G5E8X0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn20G5E8X0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Cldn20G5E8X0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn20G5E8X0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.24■□□□□ 0.67
Cldn20G5E8X0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.24■□□□□ 0.67
Cldn20G5E8X0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn20G5E8X0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cldn20G5E8X0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn20G5E8X0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn20G5E8X0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn20G5E8X0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Cldn20G5E8X0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn20G5E8X0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn20G5E8X0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn20G5E8X0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cldn20G5E8X0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn20G5E8X0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn20G5E8X0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.22■□□□□ 0.67
Cldn20G5E8X0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn20G5E8X0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn20G5E8X0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn20G5E8X0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn20G5E8X0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
Cldn20G5E8X0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn20G5E8X0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn20G5E8X0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.2■□□□□ 0.66
Cldn20G5E8X0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms