Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Gm12887B1AVM1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Gm12887B1AVM1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm12887B1AVM1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm12887B1AVM1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm12887B1AVM1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm12887B1AVM1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm12887B1AVM1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm12887B1AVM1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.08■□□□□ 0.48
Gm12887B1AVM1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm12887B1AVM1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm12887B1AVM1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm12887B1AVM1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Gm12887B1AVM1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm12887B1AVM1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.07■□□□□ 0.48
Gm12887B1AVM1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm12887B1AVM1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm12887B1AVM1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm12887B1AVM1 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.06■□□□□ 0.48
Gm12887B1AVM1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm12887B1AVM1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm12887B1AVM1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Gm12887B1AVM1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.06■□□□□ 0.48
Gm12887B1AVM1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm12887B1AVM1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm12887B1AVM1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm12887B1AVM1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Gm12887B1AVM1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm12887B1AVM1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm12887B1AVM1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm12887B1AVM1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Gm12887B1AVM1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Gm12887B1AVM1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Gm12887B1AVM1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gm12887B1AVM1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm12887B1AVM1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gm12887B1AVM1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm12887B1AVM1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.03■□□□□ 0.48
Gm12887B1AVM1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm12887B1AVM1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.03■□□□□ 0.48
Gm12887B1AVM1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm12887B1AVM1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Gm12887B1AVM1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm12887B1AVM1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm12887B1AVM1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Gm12887B1AVM1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm12887B1AVM1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm12887B1AVM1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm12887B1AVM1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm12887B1AVM1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm12887B1AVM1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm12887B1AVM1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm12887B1AVM1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.01■□□□□ 0.47
Gm12887B1AVM1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Gm12887B1AVM1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm12887B1AVM1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm12887B1AVM1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Gm12887B1AVM1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18■□□□□ 0.47
Gm12887B1AVM1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Gm12887B1AVM1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Gm12887B1AVM1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm12887B1AVM1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm12887B1AVM1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm12887B1AVM1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
Gm12887B1AVM1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm12887B1AVM1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.98■□□□□ 0.47
Gm12887B1AVM1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm12887B1AVM1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm12887B1AVM1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm12887B1AVM1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm12887B1AVM1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Gm12887B1AVM1 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.97■□□□□ 0.47
Gm12887B1AVM1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm12887B1AVM1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.97■□□□□ 0.47
Gm12887B1AVM1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm12887B1AVM1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.97■□□□□ 0.47
Gm12887B1AVM1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm12887B1AVM1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.96■□□□□ 0.47
Gm12887B1AVM1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm12887B1AVM1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Gm12887B1AVM1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm12887B1AVM1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Gm12887B1AVM1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm12887B1AVM1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Gm12887B1AVM1 Gm24970-201ENSMUST00000175582 82 ntBASIC17.95■□□□□ 0.46
Gm12887B1AVM1 Zfp131-205ENSMUST00000223812 663 ntBASIC17.95■□□□□ 0.46
Gm12887B1AVM1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm12887B1AVM1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm12887B1AVM1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm12887B1AVM1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.94■□□□□ 0.46
Gm12887B1AVM1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm12887B1AVM1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm12887B1AVM1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.93■□□□□ 0.46
Gm12887B1AVM1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Gm12887B1AVM1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm12887B1AVM1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Gm12887B1AVM1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm12887B1AVM1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Gm12887B1AVM1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Gm12887B1AVM1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms