Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MSGN1A6NI15 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.24■□□□□ 0.83
MSGN1A6NI15 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MSGN1A6NI15 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
MSGN1A6NI15 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MSGN1A6NI15 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.23■□□□□ 0.83
MSGN1A6NI15 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MSGN1A6NI15 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MSGN1A6NI15 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.23■□□□□ 0.83
MSGN1A6NI15 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MSGN1A6NI15 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.22■□□□□ 0.83
MSGN1A6NI15 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
MSGN1A6NI15 DUX4L29-201ENST00000425409 679 ntBASIC20.22■□□□□ 0.83
MSGN1A6NI15 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
MSGN1A6NI15 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MSGN1A6NI15 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MSGN1A6NI15 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.22■□□□□ 0.83
MSGN1A6NI15 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MSGN1A6NI15 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
MSGN1A6NI15 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.21■□□□□ 0.83
MSGN1A6NI15 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MSGN1A6NI15 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MSGN1A6NI15 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MSGN1A6NI15 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MSGN1A6NI15 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MSGN1A6NI15 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MSGN1A6NI15 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
MSGN1A6NI15 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSGN1A6NI15 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.2■□□□□ 0.82
MSGN1A6NI15 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.2■□□□□ 0.82
MSGN1A6NI15 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSGN1A6NI15 AC021231.2-201ENST00000594613 730 ntBASIC20.2■□□□□ 0.82
MSGN1A6NI15 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSGN1A6NI15 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSGN1A6NI15 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MSGN1A6NI15 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.19■□□□□ 0.82
MSGN1A6NI15 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MSGN1A6NI15 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MSGN1A6NI15 AC133561.1-201ENST00000568600 2415 ntBASIC20.19■□□□□ 0.82
MSGN1A6NI15 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MSGN1A6NI15 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
MSGN1A6NI15 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.19■□□□□ 0.82
MSGN1A6NI15 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MSGN1A6NI15 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.19■□□□□ 0.82
MSGN1A6NI15 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSGN1A6NI15 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MSGN1A6NI15 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSGN1A6NI15 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.18■□□□□ 0.82
MSGN1A6NI15 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
MSGN1A6NI15 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
MSGN1A6NI15 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MSGN1A6NI15 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.17■□□□□ 0.82
MSGN1A6NI15 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MSGN1A6NI15 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MSGN1A6NI15 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MSGN1A6NI15 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSGN1A6NI15 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSGN1A6NI15 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MSGN1A6NI15 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.16■□□□□ 0.82
MSGN1A6NI15 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MSGN1A6NI15 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MSGN1A6NI15 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MSGN1A6NI15 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
MSGN1A6NI15 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MSGN1A6NI15 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MSGN1A6NI15 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MSGN1A6NI15 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MSGN1A6NI15 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
MSGN1A6NI15 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MSGN1A6NI15 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MSGN1A6NI15 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MSGN1A6NI15 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MSGN1A6NI15 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
MSGN1A6NI15 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
MSGN1A6NI15 AP004609.3-201ENST00000610705 1884 ntBASIC20.13■□□□□ 0.81
MSGN1A6NI15 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
MSGN1A6NI15 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
MSGN1A6NI15 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MSGN1A6NI15 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
MSGN1A6NI15 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.13■□□□□ 0.81
MSGN1A6NI15 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
MSGN1A6NI15 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.13■□□□□ 0.81
MSGN1A6NI15 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.13■□□□□ 0.81
MSGN1A6NI15 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MSGN1A6NI15 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MSGN1A6NI15 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.12■□□□□ 0.81
MSGN1A6NI15 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.11■□□□□ 0.81
MSGN1A6NI15 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MSGN1A6NI15 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
MSGN1A6NI15 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
MSGN1A6NI15 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.1■□□□□ 0.81
MSGN1A6NI15 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MSGN1A6NI15 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MSGN1A6NI15 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.1■□□□□ 0.81
MSGN1A6NI15 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MSGN1A6NI15 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MSGN1A6NI15 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MSGN1A6NI15 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.1■□□□□ 0.81
MSGN1A6NI15 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MSGN1A6NI15 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms