Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IsxA1A546 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
IsxA1A546 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
IsxA1A546 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IsxA1A546 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IsxA1A546 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IsxA1A546 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
IsxA1A546 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IsxA1A546 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
IsxA1A546 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
IsxA1A546 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
IsxA1A546 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
IsxA1A546 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
IsxA1A546 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
IsxA1A546 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
IsxA1A546 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
IsxA1A546 Gm9397-201ENSMUST00000200125 605 ntBASIC20.73■□□□□ 0.91
IsxA1A546 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
IsxA1A546 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
IsxA1A546 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
IsxA1A546 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.72■□□□□ 0.91
IsxA1A546 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IsxA1A546 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
IsxA1A546 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
IsxA1A546 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
IsxA1A546 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
IsxA1A546 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
IsxA1A546 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
IsxA1A546 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
IsxA1A546 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
IsxA1A546 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
IsxA1A546 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
IsxA1A546 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IsxA1A546 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
IsxA1A546 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
IsxA1A546 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.69■□□□□ 0.9
IsxA1A546 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IsxA1A546 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IsxA1A546 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IsxA1A546 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
IsxA1A546 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IsxA1A546 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IsxA1A546 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IsxA1A546 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
IsxA1A546 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.66■□□□□ 0.9
IsxA1A546 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
IsxA1A546 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
IsxA1A546 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
IsxA1A546 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IsxA1A546 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.65■□□□□ 0.9
IsxA1A546 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
IsxA1A546 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
IsxA1A546 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
IsxA1A546 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
IsxA1A546 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
IsxA1A546 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
IsxA1A546 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IsxA1A546 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IsxA1A546 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
IsxA1A546 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IsxA1A546 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
IsxA1A546 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
IsxA1A546 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
IsxA1A546 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.62■□□□□ 0.89
IsxA1A546 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IsxA1A546 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IsxA1A546 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
IsxA1A546 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
IsxA1A546 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IsxA1A546 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IsxA1A546 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IsxA1A546 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IsxA1A546 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.6■□□□□ 0.89
IsxA1A546 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
IsxA1A546 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IsxA1A546 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
IsxA1A546 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
IsxA1A546 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IsxA1A546 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
IsxA1A546 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
IsxA1A546 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IsxA1A546 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
IsxA1A546 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
IsxA1A546 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
IsxA1A546 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
IsxA1A546 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
IsxA1A546 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
IsxA1A546 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.58■□□□□ 0.88
IsxA1A546 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.58■□□□□ 0.88
IsxA1A546 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
IsxA1A546 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.57■□□□□ 0.88
IsxA1A546 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
IsxA1A546 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
IsxA1A546 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.56■□□□□ 0.88
IsxA1A546 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.56■□□□□ 0.88
IsxA1A546 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IsxA1A546 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IsxA1A546 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
IsxA1A546 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IsxA1A546 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms