Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv29A0A0G2LB96 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv29A0A0G2LB96 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv29A0A0G2LB96 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Trbv29A0A0G2LB96 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Trbv29A0A0G2LB96 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv29A0A0G2LB96 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trbv29A0A0G2LB96 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv29A0A0G2LB96 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.5■□□□□ 0.55
Trbv29A0A0G2LB96 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
Trbv29A0A0G2LB96 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.5■□□□□ 0.55
Trbv29A0A0G2LB96 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv29A0A0G2LB96 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv29A0A0G2LB96 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.49■□□□□ 0.55
Trbv29A0A0G2LB96 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv29A0A0G2LB96 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv29A0A0G2LB96 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv29A0A0G2LB96 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trbv29A0A0G2LB96 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv29A0A0G2LB96 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv29A0A0G2LB96 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv29A0A0G2LB96 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv29A0A0G2LB96 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv29A0A0G2LB96 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv29A0A0G2LB96 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.47■□□□□ 0.55
Trbv29A0A0G2LB96 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv29A0A0G2LB96 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv29A0A0G2LB96 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv29A0A0G2LB96 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv29A0A0G2LB96 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv29A0A0G2LB96 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv29A0A0G2LB96 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv29A0A0G2LB96 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv29A0A0G2LB96 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv29A0A0G2LB96 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv29A0A0G2LB96 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv29A0A0G2LB96 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv29A0A0G2LB96 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv29A0A0G2LB96 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv29A0A0G2LB96 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv29A0A0G2LB96 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv29A0A0G2LB96 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.44■□□□□ 0.54
Trbv29A0A0G2LB96 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv29A0A0G2LB96 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv29A0A0G2LB96 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv29A0A0G2LB96 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trbv29A0A0G2LB96 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.43■□□□□ 0.54
Trbv29A0A0G2LB96 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv29A0A0G2LB96 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv29A0A0G2LB96 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.43■□□□□ 0.54
Trbv29A0A0G2LB96 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv29A0A0G2LB96 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv29A0A0G2LB96 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv29A0A0G2LB96 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv29A0A0G2LB96 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv29A0A0G2LB96 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv29A0A0G2LB96 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv29A0A0G2LB96 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.42■□□□□ 0.54
Trbv29A0A0G2LB96 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv29A0A0G2LB96 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.42■□□□□ 0.54
Trbv29A0A0G2LB96 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.42■□□□□ 0.54
Trbv29A0A0G2LB96 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.41■□□□□ 0.54
Trbv29A0A0G2LB96 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv29A0A0G2LB96 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv29A0A0G2LB96 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv29A0A0G2LB96 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv29A0A0G2LB96 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.4■□□□□ 0.54
Trbv29A0A0G2LB96 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv29A0A0G2LB96 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trbv29A0A0G2LB96 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv29A0A0G2LB96 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv29A0A0G2LB96 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trbv29A0A0G2LB96 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv29A0A0G2LB96 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv29A0A0G2LB96 Gm6821-201ENSMUST00000107540 542 ntBASIC18.38■□□□□ 0.53
Trbv29A0A0G2LB96 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv29A0A0G2LB96 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv29A0A0G2LB96 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv29A0A0G2LB96 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv29A0A0G2LB96 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv29A0A0G2LB96 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.37■□□□□ 0.53
Trbv29A0A0G2LB96 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trbv29A0A0G2LB96 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.37■□□□□ 0.53
Trbv29A0A0G2LB96 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trbv29A0A0G2LB96 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trbv29A0A0G2LB96 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv29A0A0G2LB96 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv29A0A0G2LB96 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv29A0A0G2LB96 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv29A0A0G2LB96 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.36■□□□□ 0.53
Trbv29A0A0G2LB96 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.36■□□□□ 0.53
Trbv29A0A0G2LB96 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.36■□□□□ 0.53
Trbv29A0A0G2LB96 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv29A0A0G2LB96 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv29A0A0G2LB96 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv29A0A0G2LB96 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv29A0A0G2LB96 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.35■□□□□ 0.53
Trbv29A0A0G2LB96 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trbv29A0A0G2LB96 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv29A0A0G2LB96 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms