Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9812-201ENSMUST00000061934 968 ntBASIC19.56■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.56■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.55■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.55■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.55■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.52■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav15d-2-dv6d-2A0A0G2JGQ7 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.51■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.51■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.5■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.5■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.5■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.49■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Mir3960-201ENSMUST00000198213 73 ntBASIC19.49■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.48■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.48■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.47■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm7432-201ENSMUST00000210343 879 ntBASIC19.47■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.47■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.46■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.45■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.44■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 135.9 ms