Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV13-1A0A0B4J241 MIR3665-201ENST00000578708 105 ntBASIC16.92■□□□□ 0.3
TRAV13-1A0A0B4J241 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV13-1A0A0B4J241 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV13-1A0A0B4J241 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV13-1A0A0B4J241 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRAV13-1A0A0B4J241 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRAV13-1A0A0B4J241 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV13-1A0A0B4J241 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV13-1A0A0B4J241 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV13-1A0A0B4J241 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV13-1A0A0B4J241 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
TRAV13-1A0A0B4J241 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV13-1A0A0B4J241 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRAV13-1A0A0B4J241 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRAV13-1A0A0B4J241 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRAV13-1A0A0B4J241 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV13-1A0A0B4J241 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV13-1A0A0B4J241 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV13-1A0A0B4J241 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV13-1A0A0B4J241 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV13-1A0A0B4J241 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV13-1A0A0B4J241 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRAV13-1A0A0B4J241 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV13-1A0A0B4J241 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TRAV13-1A0A0B4J241 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV13-1A0A0B4J241 AC110285.7-201ENST00000624417 1536 ntBASIC16.9■□□□□ 0.3
TRAV13-1A0A0B4J241 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV13-1A0A0B4J241 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
TRAV13-1A0A0B4J241 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV13-1A0A0B4J241 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV13-1A0A0B4J241 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV13-1A0A0B4J241 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV13-1A0A0B4J241 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV13-1A0A0B4J241 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV13-1A0A0B4J241 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV13-1A0A0B4J241 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV13-1A0A0B4J241 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV13-1A0A0B4J241 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV13-1A0A0B4J241 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRAV13-1A0A0B4J241 AC142472.1-201ENST00000612013 1741 ntBASIC16.87■□□□□ 0.29
TRAV13-1A0A0B4J241 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV13-1A0A0B4J241 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV13-1A0A0B4J241 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV13-1A0A0B4J241 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV13-1A0A0B4J241 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV13-1A0A0B4J241 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV13-1A0A0B4J241 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV13-1A0A0B4J241 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV13-1A0A0B4J241 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV13-1A0A0B4J241 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV13-1A0A0B4J241 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV13-1A0A0B4J241 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV13-1A0A0B4J241 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRAV13-1A0A0B4J241 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV13-1A0A0B4J241 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV13-1A0A0B4J241 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV13-1A0A0B4J241 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV13-1A0A0B4J241 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV13-1A0A0B4J241 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC16.85■□□□□ 0.29
TRAV13-1A0A0B4J241 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRAV13-1A0A0B4J241 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV13-1A0A0B4J241 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
TRAV13-1A0A0B4J241 WHAMMP3-201ENST00000611636 1609 ntBASIC16.85■□□□□ 0.29
TRAV13-1A0A0B4J241 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV13-1A0A0B4J241 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV13-1A0A0B4J241 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV13-1A0A0B4J241 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV13-1A0A0B4J241 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV13-1A0A0B4J241 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRAV13-1A0A0B4J241 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TRAV13-1A0A0B4J241 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TRAV13-1A0A0B4J241 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV13-1A0A0B4J241 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TRAV13-1A0A0B4J241 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV13-1A0A0B4J241 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV13-1A0A0B4J241 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TRAV13-1A0A0B4J241 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV13-1A0A0B4J241 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV13-1A0A0B4J241 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC16.82■□□□□ 0.28
TRAV13-1A0A0B4J241 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV13-1A0A0B4J241 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV13-1A0A0B4J241 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV13-1A0A0B4J241 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAV13-1A0A0B4J241 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV13-1A0A0B4J241 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV13-1A0A0B4J241 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV13-1A0A0B4J241 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV13-1A0A0B4J241 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV13-1A0A0B4J241 AP006261.1-201ENST00000584783 668 ntBASIC16.81■□□□□ 0.28
TRAV13-1A0A0B4J241 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV13-1A0A0B4J241 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV13-1A0A0B4J241 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV13-1A0A0B4J241 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV13-1A0A0B4J241 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV13-1A0A0B4J241 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV13-1A0A0B4J241 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV13-1A0A0B4J241 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV13-1A0A0B4J241 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV13-1A0A0B4J241 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms