Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
IGHV3-43A0A0B4J1X8 MIR7108-201ENST00000614319 87 ntBASIC20.29■□□□□ 0.84
IGHV3-43A0A0B4J1X8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IGHV3-43A0A0B4J1X8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
IGHV3-43A0A0B4J1X8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.28■□□□□ 0.84
IGHV3-43A0A0B4J1X8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.28■□□□□ 0.84
IGHV3-43A0A0B4J1X8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.28■□□□□ 0.84
IGHV3-43A0A0B4J1X8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.27■□□□□ 0.84
IGHV3-43A0A0B4J1X8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IGHV3-43A0A0B4J1X8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
IGHV3-43A0A0B4J1X8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IGHV3-43A0A0B4J1X8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.26■□□□□ 0.83
IGHV3-43A0A0B4J1X8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.26■□□□□ 0.83
IGHV3-43A0A0B4J1X8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
IGHV3-43A0A0B4J1X8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IGHV3-43A0A0B4J1X8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IGHV3-43A0A0B4J1X8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.26■□□□□ 0.83
IGHV3-43A0A0B4J1X8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
IGHV3-43A0A0B4J1X8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.26■□□□□ 0.83
IGHV3-43A0A0B4J1X8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IGHV3-43A0A0B4J1X8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.26■□□□□ 0.83
IGHV3-43A0A0B4J1X8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IGHV3-43A0A0B4J1X8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IGHV3-43A0A0B4J1X8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IGHV3-43A0A0B4J1X8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IGHV3-43A0A0B4J1X8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
IGHV3-43A0A0B4J1X8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.25■□□□□ 0.83
IGHV3-43A0A0B4J1X8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
IGHV3-43A0A0B4J1X8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
IGHV3-43A0A0B4J1X8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IGHV3-43A0A0B4J1X8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.25■□□□□ 0.83
IGHV3-43A0A0B4J1X8 AL359258.2-201ENST00000564063 1566 ntBASIC20.25■□□□□ 0.83
IGHV3-43A0A0B4J1X8 AC092803.2-201ENST00000564287 1899 ntBASIC20.24■□□□□ 0.83
IGHV3-43A0A0B4J1X8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IGHV3-43A0A0B4J1X8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.24■□□□□ 0.83
IGHV3-43A0A0B4J1X8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IGHV3-43A0A0B4J1X8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IGHV3-43A0A0B4J1X8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IGHV3-43A0A0B4J1X8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.24■□□□□ 0.83
IGHV3-43A0A0B4J1X8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.23■□□□□ 0.83
IGHV3-43A0A0B4J1X8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
IGHV3-43A0A0B4J1X8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
IGHV3-43A0A0B4J1X8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
IGHV3-43A0A0B4J1X8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
IGHV3-43A0A0B4J1X8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IGHV3-43A0A0B4J1X8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
IGHV3-43A0A0B4J1X8 AC145676.1-201ENST00000514988 2004 ntBASIC20.22■□□□□ 0.83
IGHV3-43A0A0B4J1X8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IGHV3-43A0A0B4J1X8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IGHV3-43A0A0B4J1X8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IGHV3-43A0A0B4J1X8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
IGHV3-43A0A0B4J1X8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
IGHV3-43A0A0B4J1X8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IGHV3-43A0A0B4J1X8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IGHV3-43A0A0B4J1X8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IGHV3-43A0A0B4J1X8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IGHV3-43A0A0B4J1X8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IGHV3-43A0A0B4J1X8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
IGHV3-43A0A0B4J1X8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IGHV3-43A0A0B4J1X8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IGHV3-43A0A0B4J1X8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IGHV3-43A0A0B4J1X8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IGHV3-43A0A0B4J1X8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
IGHV3-43A0A0B4J1X8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
IGHV3-43A0A0B4J1X8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
IGHV3-43A0A0B4J1X8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.19■□□□□ 0.82
IGHV3-43A0A0B4J1X8 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.19■□□□□ 0.82
IGHV3-43A0A0B4J1X8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IGHV3-43A0A0B4J1X8 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.19■□□□□ 0.82
IGHV3-43A0A0B4J1X8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IGHV3-43A0A0B4J1X8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IGHV3-43A0A0B4J1X8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.19■□□□□ 0.82
IGHV3-43A0A0B4J1X8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.19■□□□□ 0.82
IGHV3-43A0A0B4J1X8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
IGHV3-43A0A0B4J1X8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
IGHV3-43A0A0B4J1X8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.18■□□□□ 0.82
IGHV3-43A0A0B4J1X8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
IGHV3-43A0A0B4J1X8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
IGHV3-43A0A0B4J1X8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
IGHV3-43A0A0B4J1X8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IGHV3-43A0A0B4J1X8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.18■□□□□ 0.82
IGHV3-43A0A0B4J1X8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IGHV3-43A0A0B4J1X8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IGHV3-43A0A0B4J1X8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IGHV3-43A0A0B4J1X8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
IGHV3-43A0A0B4J1X8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
IGHV3-43A0A0B4J1X8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IGHV3-43A0A0B4J1X8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
IGHV3-43A0A0B4J1X8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.16■□□□□ 0.82
IGHV3-43A0A0B4J1X8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
IGHV3-43A0A0B4J1X8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
IGHV3-43A0A0B4J1X8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
IGHV3-43A0A0B4J1X8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.16■□□□□ 0.82
IGHV3-43A0A0B4J1X8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.16■□□□□ 0.82
IGHV3-43A0A0B4J1X8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IGHV3-43A0A0B4J1X8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
IGHV3-43A0A0B4J1X8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IGHV3-43A0A0B4J1X8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IGHV3-43A0A0B4J1X8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
IGHV3-43A0A0B4J1X8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms