Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ighv1-42A0A0A6YY38 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ighv1-42A0A0A6YY38 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.81■□□□□ 0.92
Ighv1-42A0A0A6YY38 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ighv1-42A0A0A6YY38 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ighv1-42A0A0A6YY38 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ighv1-42A0A0A6YY38 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.8■□□□□ 0.92
Ighv1-42A0A0A6YY38 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ighv1-42A0A0A6YY38 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ighv1-42A0A0A6YY38 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ighv1-42A0A0A6YY38 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ighv1-42A0A0A6YY38 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Ighv1-42A0A0A6YY38 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Ighv1-42A0A0A6YY38 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ighv1-42A0A0A6YY38 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ighv1-42A0A0A6YY38 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ighv1-42A0A0A6YY38 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.79■□□□□ 0.92
Ighv1-42A0A0A6YY38 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.79■□□□□ 0.92
Ighv1-42A0A0A6YY38 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ighv1-42A0A0A6YY38 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ighv1-42A0A0A6YY38 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ighv1-42A0A0A6YY38 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ighv1-42A0A0A6YY38 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.78■□□□□ 0.92
Ighv1-42A0A0A6YY38 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ighv1-42A0A0A6YY38 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.78■□□□□ 0.92
Ighv1-42A0A0A6YY38 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ighv1-42A0A0A6YY38 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ighv1-42A0A0A6YY38 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ighv1-42A0A0A6YY38 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ighv1-42A0A0A6YY38 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ighv1-42A0A0A6YY38 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.77■□□□□ 0.92
Ighv1-42A0A0A6YY38 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ighv1-42A0A0A6YY38 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Ighv1-42A0A0A6YY38 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ighv1-42A0A0A6YY38 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Ighv1-42A0A0A6YY38 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ighv1-42A0A0A6YY38 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ighv1-42A0A0A6YY38 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Ighv1-42A0A0A6YY38 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ighv1-42A0A0A6YY38 Gm43566-201ENSMUST00000196851 808 ntBASIC20.76■□□□□ 0.91
Ighv1-42A0A0A6YY38 Gm45444-201ENSMUST00000211394 898 ntBASIC20.76■□□□□ 0.91
Ighv1-42A0A0A6YY38 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ighv1-42A0A0A6YY38 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ighv1-42A0A0A6YY38 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Ighv1-42A0A0A6YY38 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.75■□□□□ 0.91
Ighv1-42A0A0A6YY38 Gm15546-201ENSMUST00000122095 826 ntBASIC20.75■□□□□ 0.91
Ighv1-42A0A0A6YY38 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ighv1-42A0A0A6YY38 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ighv1-42A0A0A6YY38 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ighv1-42A0A0A6YY38 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Ighv1-42A0A0A6YY38 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ighv1-42A0A0A6YY38 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ighv1-42A0A0A6YY38 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ighv1-42A0A0A6YY38 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ighv1-42A0A0A6YY38 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ighv1-42A0A0A6YY38 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ighv1-42A0A0A6YY38 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ighv1-42A0A0A6YY38 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ighv1-42A0A0A6YY38 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ighv1-42A0A0A6YY38 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ighv1-42A0A0A6YY38 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ighv1-42A0A0A6YY38 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ighv1-42A0A0A6YY38 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ighv1-42A0A0A6YY38 Gm13238-201ENSMUST00000117655 780 ntBASIC20.72■□□□□ 0.91
Ighv1-42A0A0A6YY38 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ighv1-42A0A0A6YY38 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.72■□□□□ 0.91
Ighv1-42A0A0A6YY38 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.71■□□□□ 0.91
Ighv1-42A0A0A6YY38 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ighv1-42A0A0A6YY38 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ighv1-42A0A0A6YY38 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ighv1-42A0A0A6YY38 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.7■□□□□ 0.9
Ighv1-42A0A0A6YY38 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ighv1-42A0A0A6YY38 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ighv1-42A0A0A6YY38 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ighv1-42A0A0A6YY38 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ighv1-42A0A0A6YY38 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ighv1-42A0A0A6YY38 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ighv1-42A0A0A6YY38 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ighv1-42A0A0A6YY38 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ighv1-42A0A0A6YY38 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ighv1-42A0A0A6YY38 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
Ighv1-42A0A0A6YY38 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ighv1-42A0A0A6YY38 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.68■□□□□ 0.9
Ighv1-42A0A0A6YY38 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ighv1-42A0A0A6YY38 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ighv1-42A0A0A6YY38 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ighv1-42A0A0A6YY38 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ighv1-42A0A0A6YY38 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ighv1-42A0A0A6YY38 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ighv1-42A0A0A6YY38 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.66■□□□□ 0.9
Ighv1-42A0A0A6YY38 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ighv1-42A0A0A6YY38 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ighv1-42A0A0A6YY38 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ighv1-42A0A0A6YY38 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ighv1-42A0A0A6YY38 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ighv1-42A0A0A6YY38 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.65■□□□□ 0.9
Ighv1-42A0A0A6YY38 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ighv1-42A0A0A6YY38 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.65■□□□□ 0.9
Ighv1-42A0A0A6YY38 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.64■□□□□ 0.89
Ighv1-42A0A0A6YY38 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms