Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9d-1A0A075B699 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9d-1A0A075B699 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trav9d-1A0A075B699 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.14■□□□□ 0.33
Trav9d-1A0A075B699 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9d-1A0A075B699 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
Trav9d-1A0A075B699 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9d-1A0A075B699 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9d-1A0A075B699 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9d-1A0A075B699 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav9d-1A0A075B699 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav9d-1A0A075B699 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
Trav9d-1A0A075B699 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav9d-1A0A075B699 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav9d-1A0A075B699 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav9d-1A0A075B699 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav9d-1A0A075B699 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav9d-1A0A075B699 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav9d-1A0A075B699 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav9d-1A0A075B699 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav9d-1A0A075B699 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav9d-1A0A075B699 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav9d-1A0A075B699 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav9d-1A0A075B699 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav9d-1A0A075B699 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav9d-1A0A075B699 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.09■□□□□ 0.33
Trav9d-1A0A075B699 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav9d-1A0A075B699 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav9d-1A0A075B699 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav9d-1A0A075B699 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trav9d-1A0A075B699 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav9d-1A0A075B699 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trav9d-1A0A075B699 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.08■□□□□ 0.33
Trav9d-1A0A075B699 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav9d-1A0A075B699 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav9d-1A0A075B699 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.08■□□□□ 0.32
Trav9d-1A0A075B699 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav9d-1A0A075B699 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav9d-1A0A075B699 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trav9d-1A0A075B699 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav9d-1A0A075B699 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trav9d-1A0A075B699 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav9d-1A0A075B699 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9d-1A0A075B699 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9d-1A0A075B699 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9d-1A0A075B699 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9d-1A0A075B699 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9d-1A0A075B699 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9d-1A0A075B699 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.07■□□□□ 0.32
Trav9d-1A0A075B699 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trav9d-1A0A075B699 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav9d-1A0A075B699 Gm4799-201ENSMUST00000095396 657 ntBASIC17.06■□□□□ 0.32
Trav9d-1A0A075B699 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trav9d-1A0A075B699 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9d-1A0A075B699 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav9d-1A0A075B699 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav9d-1A0A075B699 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav9d-1A0A075B699 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trav9d-1A0A075B699 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav9d-1A0A075B699 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.05■□□□□ 0.32
Trav9d-1A0A075B699 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav9d-1A0A075B699 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav9d-1A0A075B699 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9d-1A0A075B699 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav9d-1A0A075B699 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9d-1A0A075B699 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9d-1A0A075B699 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9d-1A0A075B699 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9d-1A0A075B699 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9d-1A0A075B699 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9d-1A0A075B699 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav9d-1A0A075B699 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav9d-1A0A075B699 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav9d-1A0A075B699 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav9d-1A0A075B699 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav9d-1A0A075B699 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.03■□□□□ 0.32
Trav9d-1A0A075B699 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav9d-1A0A075B699 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav9d-1A0A075B699 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.03■□□□□ 0.32
Trav9d-1A0A075B699 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9d-1A0A075B699 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.02■□□□□ 0.32
Trav9d-1A0A075B699 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9d-1A0A075B699 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trav9d-1A0A075B699 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.02■□□□□ 0.32
Trav9d-1A0A075B699 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav9d-1A0A075B699 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trav9d-1A0A075B699 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav9d-1A0A075B699 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.01■□□□□ 0.31
Trav9d-1A0A075B699 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9d-1A0A075B699 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9d-1A0A075B699 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav9d-1A0A075B699 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trav9d-1A0A075B699 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17■□□□□ 0.31
Trav9d-1A0A075B699 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trav9d-1A0A075B699 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav9d-1A0A075B699 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav9d-1A0A075B699 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav9d-1A0A075B699 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav9d-1A0A075B699 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav9d-1A0A075B699 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 109.4 ms