Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
4933424G06RikA0A140LIP3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
4933424G06RikA0A140LIP3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
4933424G06RikA0A140LIP3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
4933424G06RikA0A140LIP3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
4933424G06RikA0A140LIP3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
4933424G06RikA0A140LIP3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.27■□□□□ 0.03
4933424G06RikA0A140LIP3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
4933424G06RikA0A140LIP3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
4933424G06RikA0A140LIP3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Gm24158-201ENSMUST00000175263 71 ntBASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Gm10253-201ENSMUST00000194270 940 ntBASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
4933424G06RikA0A140LIP3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Asic1-205ENSMUST00000228185 1818 ntBASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Mir449b-201ENSMUST00000104833 80 ntBASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 AA543401-201ENSMUST00000164248 1269 ntBASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
4933424G06RikA0A140LIP3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
4933424G06RikA0A140LIP3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
4933424G06RikA0A140LIP3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
4933424G06RikA0A140LIP3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
4933424G06RikA0A140LIP3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
4933424G06RikA0A140LIP3 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.24■□□□□ 0.03
4933424G06RikA0A140LIP3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
4933424G06RikA0A140LIP3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
4933424G06RikA0A140LIP3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
4933424G06RikA0A140LIP3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
4933424G06RikA0A140LIP3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
4933424G06RikA0A140LIP3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
4933424G06RikA0A140LIP3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
4933424G06RikA0A140LIP3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
4933424G06RikA0A140LIP3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
4933424G06RikA0A140LIP3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
4933424G06RikA0A140LIP3 Gm18737-201ENSMUST00000173594 937 ntBASIC15.24■□□□□ 0.03
4933424G06RikA0A140LIP3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms