Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.016e-6■□□□□ 9.2
SND1Q7KZF4 NCBP2-205ENST00000428425 2220 ntTSL 1 (best)14.92□□□□□ -0.026e-6■□□□□ 9.2
SND1Q7KZF4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.026e-6■□□□□ 9.2
SND1Q7KZF4 EXOSC7-210ENST00000491476 1395 ntTSL 514.89□□□□□ -0.036e-6■□□□□ 9.2
SND1Q7KZF4 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC14.85□□□□□ -0.036e-6■□□□□ 9.2
SND1Q7KZF4 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.042e-7■□□□□ 9.2
SND1Q7KZF4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.79□□□□□ -0.041e-9■□□□□ 9.2
SND1Q7KZF4 EXOSC7-203ENST00000461361 1593 ntTSL 214.77□□□□□ -0.046e-6■□□□□ 9.2
SND1Q7KZF4 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC14.6□□□□□ -0.076e-6■□□□□ 9.2
SND1Q7KZF4 SUPT4H1-205ENST00000581166 1401 ntTSL 214.51□□□□□ -0.096e-6■□□□□ 9.2
SND1Q7KZF4 RNH1-209ENST00000525522 3281 ntTSL 1 (best)14.48□□□□□ -0.092e-7■□□□□ 9.2
SND1Q7KZF4 CYSTM1-202ENST00000504227 588 ntTSL 514.44□□□□□ -0.12e-7■□□□□ 9.2
SND1Q7KZF4 CYSTM1-204ENST00000509789 813 ntTSL 414.44□□□□□ -0.12e-7■□□□□ 9.2
SND1Q7KZF4 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC14.27□□□□□ -0.126e-6■□□□□ 9.2
SND1Q7KZF4 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC14.17□□□□□ -0.146e-6■□□□□ 9.2
SND1Q7KZF4 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC14.05□□□□□ -0.166e-6■□□□□ 9.2
SND1Q7KZF4 BUD23-205ENST00000428163 577 ntTSL 314.04□□□□□ -0.163e-8■□□□□ 9.2
SND1Q7KZF4 NDUFS8-207ENST00000526339 689 ntTSL 214.04□□□□□ -0.166e-6■□□□□ 9.2
SND1Q7KZF4 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.186e-6■□□□□ 9.2
SND1Q7KZF4 OCIAD1-220ENST00000509963 432 ntTSL 213.74□□□□□ -0.217e-7■□□□□ 9.2
SND1Q7KZF4 ATP2A3-215ENST00000576957 1159 ntTSL 213.73□□□□□ -0.216e-6■□□□□ 9.2
SND1Q7KZF4 EMC4-213ENST00000561372 466 ntTSL 313.66□□□□□ -0.223e-8■□□□□ 9.2
SND1Q7KZF4 H3F3B-205ENST00000587171 586 ntTSL 213.56□□□□□ -0.246e-27■□□□□ 9.2
SND1Q7KZF4 H3F3B-213ENST00000593254 894 ntTSL 513.56□□□□□ -0.246e-27■□□□□ 9.2
SND1Q7KZF4 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.261e-9■□□□□ 9.2
SND1Q7KZF4 COTL1-206ENST00000567786 531 ntTSL 313.41□□□□□ -0.266e-6■□□□□ 9.2
SND1Q7KZF4 NCBP2-201ENST00000321256 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.276e-6■□□□□ 9.2
SND1Q7KZF4 GSTK1-204ENST00000442394 2219 ntTSL 513.3□□□□□ -0.281e-9■□□□□ 9.2
SND1Q7KZF4 MSH6-204ENST00000445503 4158 ntTSL 1 (best)13.29□□□□□ -0.286e-6■□□□□ 9.2
SND1Q7KZF4 ATP2A3-211ENST00000572176 428 ntTSL 213.26□□□□□ -0.296e-6■□□□□ 9.2
SND1Q7KZF4 NUP214-226ENST00000531600 1775 ntTSL 213.2□□□□□ -0.32e-7■□□□□ 9.2
SND1Q7KZF4 EXOSC7-204ENST00000467846 1149 ntTSL 213.09□□□□□ -0.316e-6■□□□□ 9.2
SND1Q7KZF4 PRSS21-206ENST00000574265 860 ntTSL 313.07□□□□□ -0.323e-8■□□□□ 9.2
SND1Q7KZF4 EXOSC7-205ENST00000468667 831 ntTSL 512.9□□□□□ -0.346e-6■□□□□ 9.2
SND1Q7KZF4 NDUFS8-211ENST00000529645 606 ntTSL 312.9□□□□□ -0.346e-6■□□□□ 9.2
SND1Q7KZF4 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC12.88□□□□□ -0.356e-6■□□□□ 9.2
SND1Q7KZF4 PRSS21-204ENST00000570629 626 ntTSL 212.86□□□□□ -0.353e-8■□□□□ 9.2
SND1Q7KZF4 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.356e-6■□□□□ 9.2
SND1Q7KZF4 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC12.81□□□□□ -0.361e-9■□□□□ 9.2
SND1Q7KZF4 AC087380.1-204ENST00000418729 1026 ntTSL 1 (best)12.78□□□□□ -0.366e-6■□□□□ 9.2
SND1Q7KZF4 PAFAH1B3-203ENST00000594989 649 ntTSL 512.36□□□□□ -0.436e-6■□□□□ 9.2
SND1Q7KZF4 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.446e-6■□□□□ 9.2
SND1Q7KZF4 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC12.28□□□□□ -0.442e-7■□□□□ 9.2
SND1Q7KZF4 NCBP2-210ENST00000467803 771 ntTSL 312.26□□□□□ -0.456e-6■□□□□ 9.2
SND1Q7KZF4 PPT2-252ENST00000465047 238 ntTSL 312.23□□□□□ -0.456e-6■□□□□ 9.2
SND1Q7KZF4 H3F3B-212ENST00000592643 795 ntTSL 3 BASIC12.21□□□□□ -0.456e-27■□□□□ 9.2
SND1Q7KZF4 OCIAD1-228ENST00000514981 653 ntTSL 312.18□□□□□ -0.467e-7■□□□□ 9.2
SND1Q7KZF4 GSTK1-203ENST00000436038 556 ntTSL 512.16□□□□□ -0.461e-9■□□□□ 9.2
SND1Q7KZF4 NASP-205ENST00000437901 874 ntTSL 512.13□□□□□ -0.471e-22■□□□□ 9.2
SND1Q7KZF4 NASP-204ENST00000437362 999 ntTSL 212.1□□□□□ -0.471e-22■□□□□ 9.2
SND1Q7KZF4 NASP-212ENST00000527359 743 ntTSL 312.07□□□□□ -0.481e-22■□□□□ 9.2
SND1Q7KZF4 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC11.98□□□□□ -0.496e-6■□□□□ 9.2
SND1Q7KZF4 NDUFS8-210ENST00000528492 353 ntTSL 1 (best) BASIC11.95□□□□□ -0.56e-6■□□□□ 9.2
SND1Q7KZF4 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC11.9□□□□□ -0.56e-6■□□□□ 9.2
SND1Q7KZF4 GSTK1-205ENST00000443571 850 ntTSL 2 BASIC11.89□□□□□ -0.511e-9■□□□□ 9.2
SND1Q7KZF4 MTHFD1-210ENST00000555252 2053 ntTSL 1 (best)11.87□□□□□ -0.516e-6■□□□□ 9.2
SND1Q7KZF4 NCBP2-212ENST00000479647 552 ntTSL 311.77□□□□□ -0.536e-6■□□□□ 9.2
SND1Q7KZF4 SUPT4H1-203ENST00000579289 318 ntTSL 311.59□□□□□ -0.556e-6■□□□□ 9.2
SND1Q7KZF4 VCP-204ENST00000466100 508 ntTSL 211.56□□□□□ -0.561e-9■□□□□ 9.2
SND1Q7KZF4 NUP214-204ENST00000453861 3208 ntTSL 511.22□□□□□ -0.612e-7■□□□□ 9.2
SND1Q7KZF4 H3F3B-210ENST00000591890 783 ntTSL 3 BASIC11.07□□□□□ -0.646e-27■□□□□ 9.2
SND1Q7KZF4 NASP-206ENST00000453748 2080 ntTSL 210.96□□□□□ -0.661e-22■□□□□ 9.2
SND1Q7KZF4 SUPT4H1-204ENST00000580947 574 ntAPPRIS P1 TSL 4 BASIC10.87□□□□□ -0.676e-6■□□□□ 9.2
SND1Q7KZF4 CYSTM1-203ENST00000509589 665 ntTSL 310.63□□□□□ -0.712e-7■□□□□ 9.2
SND1Q7KZF4 NASP-202ENST00000351223 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.751e-22■□□□□ 9.2
SND1Q7KZF4 NUP214-220ENST00000529286 493 ntTSL 310.22□□□□□ -0.772e-7■□□□□ 9.2
SND1Q7KZF4 EXOSC7-208ENST00000482004 559 ntTSL 410.2□□□□□ -0.786e-6■□□□□ 9.2
SND1Q7KZF4 H3F3B-204ENST00000586607 551 ntAPPRIS P1 TSL 4 BASIC10.15□□□□□ -0.786e-27■□□□□ 9.2
SND1Q7KZF4 SNRNP40-201ENST00000263694 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.796e-6■□□□□ 9.2
SND1Q7KZF4 PHB2-212ENST00000545555 309 ntTSL 510.11□□□□□ -0.796e-6■□□□□ 9.2
SND1Q7KZF4 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC9.99□□□□□ -0.816e-6■□□□□ 9.2
SND1Q7KZF4 MTHFD1-203ENST00000553391 568 ntTSL 49.97□□□□□ -0.816e-6■□□□□ 9.2
SND1Q7KZF4 PKM-211ENST00000564276 753 ntTSL 1 (best)9.86□□□□□ -0.832e-15■□□□□ 9.2
SND1Q7KZF4 SUPT4H1-206ENST00000581204 539 ntTSL 29.82□□□□□ -0.846e-6■□□□□ 9.2
SND1Q7KZF4 NASP-216ENST00000528238 894 ntAPPRIS ALT2 TSL 59.75□□□□□ -0.851e-22■□□□□ 9.2
SND1Q7KZF4 MTHFD1-201ENST00000216605 3136 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.896e-6■□□□□ 9.2
SND1Q7KZF4 GSTK1-206ENST00000473649 2692 ntTSL 29.48□□□□□ -0.891e-9■□□□□ 9.2
SND1Q7KZF4 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.892e-7■□□□□ 9.2
SND1Q7KZF4 ANXA2-223ENST00000559647 484 ntTSL 29.46□□□□□ -0.93e-8■□□□□ 9.2
SND1Q7KZF4 MGME1-205ENST00000467391 740 ntTSL 1 (best)9.37□□□□□ -0.916e-6■□□□□ 9.2
SND1Q7KZF4 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.911e-22■□□□□ 9.2
SND1Q7KZF4 BTF3-204ENST00000508901 954 ntTSL 29.35□□□□□ -0.911e-9■□□□□ 9.2
SND1Q7KZF4 SNRNP40-202ENST00000373720 1087 ntTSL 1 (best) BASIC9.3□□□□□ -0.926e-6■□□□□ 9.2
SND1Q7KZF4 NCBP2-209ENST00000463783 4161 ntTSL 1 (best)9.24□□□□□ -0.936e-6■□□□□ 9.2
SND1Q7KZF4 MCM4-214ENST00000523853 354 ntTSL 29.03□□□□□ -0.966e-6■□□□□ 9.2
SND1Q7KZF4 MGME1-204ENST00000463219 571 ntTSL 38.99□□□□□ -0.976e-6■□□□□ 9.2
SND1Q7KZF4 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.981e-22■□□□□ 9.2
SND1Q7KZF4 ATP5G2-206ENST00000550241 406 ntTSL 38.88□□□□□ -0.993e-21■□□□□ 9.2
SND1Q7KZF4 SEC31A-240ENST00000515062 597 ntTSL 38.74□□□□□ -1.013e-8■□□□□ 9.2
SND1Q7KZF4 PAICS-205ENST00000508554 698 ntTSL 28.71□□□□□ -1.022e-9■□□□□ 9.2
SND1Q7KZF4 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.021e-9■□□□□ 9.2
SND1Q7KZF4 SEC31A-213ENST00000503937 1564 ntTSL 1 (best)8.65□□□□□ -1.023e-8■□□□□ 9.2
SND1Q7KZF4 NASP-221ENST00000531612 938 ntAPPRIS ALT2 TSL 58.65□□□□□ -1.021e-22■□□□□ 9.2
SND1Q7KZF4 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.052e-7■□□□□ 9.2
SND1Q7KZF4 NASP-210ENST00000481782 3659 ntTSL 28.46□□□□□ -1.051e-22■□□□□ 9.2
SND1Q7KZF4 BTF3-209ENST00000514505 740 ntTSL 58.43□□□□□ -1.061e-9■□□□□ 9.2
SND1Q7KZF4 SDHB-206ENST00000485092 636 ntTSL 28.42□□□□□ -1.066e-6■□□□□ 9.2
SND1Q7KZF4 BTF3-208ENST00000514360 1177 ntTSL 28.37□□□□□ -1.071e-9■□□□□ 9.2
SND1Q7KZF4 NASP-218ENST00000530073 2740 ntTSL 28.35□□□□□ -1.071e-22■□□□□ 9.2
SND1Q7KZF4 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.081e-22■□□□□ 9.2
Retrieved 100 of 13,567 protein–RNA pairs in 487.3 ms