Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 TFR2-208ENST00000473571 628 ntTSL 318.41■□□□□ 0.543e-7■□□□□ 9.2
SND1Q7KZF4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.512e-8■□□□□ 9.2
SND1Q7KZF4 KPNA2-201ENST00000330459 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.742e-8■□□□□ 9.2
SND1Q7KZF4 COL18A1-205ENST00000423214 839 ntTSL 516.68■□□□□ 0.264e-14■□□□□ 9.2
SND1Q7KZF4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.83e-8■□□□□ 9.2
SND1Q7KZF4 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.073e-8■□□□□ 9.2
SND1Q7KZF4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5□□□□□ -1.613e-8■□□□□ 9.2
SND1Q7KZF4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.661e-10■□□□□ 9.2
SND1Q7KZF4 HNRNPK-206ENST00000457156 1283 ntTSL 518.54■□□□□ 0.561e-10■□□□□ 9.2
SND1Q7KZF4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.341e-10■□□□□ 9.2
SND1Q7KZF4 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.861e-10■□□□□ 9.2
SND1Q7KZF4 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.981e-10■□□□□ 9.2
SND1Q7KZF4 H3F3B-203ENST00000586518 1701 nt31.56■■■□□ 2.646e-27■□□□□ 9.2
SND1Q7KZF4 EXOSC7-207ENST00000481405 768 ntTSL 331.14■■■□□ 2.586e-6■□□□□ 9.2
SND1Q7KZF4 H3F3B-202ENST00000586270 468 ntTSL 225.55■■□□□ 1.686e-27■□□□□ 9.2
SND1Q7KZF4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.373e-8■□□□□ 9.2
SND1Q7KZF4 PHB2-208ENST00000543465 1518 ntTSL 523.3■■□□□ 1.326e-6■□□□□ 9.2
SND1Q7KZF4 RNH1-217ENST00000529768 1019 ntTSL 223.07■■□□□ 1.282e-7■□□□□ 9.2
SND1Q7KZF4 PRSS21-208ENST00000575199 679 ntTSL 222.2■■□□□ 1.143e-8■□□□□ 9.2
SND1Q7KZF4 NDUFS8-205ENST00000525419 561 ntTSL 322.14■■□□□ 1.136e-6■□□□□ 9.2
SND1Q7KZF4 CD58-204ENST00000464088 874 ntTSL 1 (best)21.54■■□□□ 1.042e-7■□□□□ 9.2
SND1Q7KZF4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.032e-7■□□□□ 9.2
SND1Q7KZF4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.032e-7■□□□□ 9.2
SND1Q7KZF4 RNH1-210ENST00000525701 1794 ntTSL 521.49■■□□□ 1.032e-7■□□□□ 9.2
SND1Q7KZF4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.032e-7■□□□□ 9.2
SND1Q7KZF4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.022e-7■□□□□ 9.2
SND1Q7KZF4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.25■□□□□ 0.996e-6■□□□□ 9.2
SND1Q7KZF4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.952e-7■□□□□ 9.2
SND1Q7KZF4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.952e-7■□□□□ 9.2
SND1Q7KZF4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.956e-6■□□□□ 9.2
SND1Q7KZF4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.84■□□□□ 0.936e-6■□□□□ 9.2
SND1Q7KZF4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.74■□□□□ 0.916e-6■□□□□ 9.2
SND1Q7KZF4 COTL1-204ENST00000564662 713 ntTSL 220.7■□□□□ 0.96e-6■□□□□ 9.2
SND1Q7KZF4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.872e-7■□□□□ 9.2
SND1Q7KZF4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.822e-7■□□□□ 9.2
SND1Q7KZF4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.03■□□□□ 0.86e-6■□□□□ 9.2
SND1Q7KZF4 PHB2-210ENST00000544888 872 ntTSL 319.9■□□□□ 0.786e-6■□□□□ 9.2
SND1Q7KZF4 PRSS21-207ENST00000574813 873 ntTSL 319.55■□□□□ 0.723e-8■□□□□ 9.2
SND1Q7KZF4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.722e-7■□□□□ 9.2
SND1Q7KZF4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.54■□□□□ 0.726e-6■□□□□ 9.2
SND1Q7KZF4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.716e-6■□□□□ 9.2
SND1Q7KZF4 BUD23-208ENST00000432522 1074 ntTSL 219.48■□□□□ 0.713e-8■□□□□ 9.2
SND1Q7KZF4 BUD23-218ENST00000496153 505 ntTSL 419.44■□□□□ 0.73e-8■□□□□ 9.2
SND1Q7KZF4 BUD23-203ENST00000421744 895 ntTSL 219.43■□□□□ 0.73e-8■□□□□ 9.2
SND1Q7KZF4 PRSS21-210ENST00000577043 814 ntTSL 519.38■□□□□ 0.693e-8■□□□□ 9.2
SND1Q7KZF4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.682e-7■□□□□ 9.2
SND1Q7KZF4 HNRNPM-206ENST00000596984 664 ntTSL 519.19■□□□□ 0.662e-7■□□□□ 9.2
SND1Q7KZF4 PRSS21-203ENST00000570594 809 ntTSL 319.06■□□□□ 0.643e-8■□□□□ 9.2
SND1Q7KZF4 RNH1-207ENST00000524464 624 ntTSL 518.99■□□□□ 0.632e-7■□□□□ 9.2
SND1Q7KZF4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.626e-27■□□□□ 9.2
SND1Q7KZF4 PHB2-211ENST00000545167 908 ntTSL 518.92■□□□□ 0.626e-6■□□□□ 9.2
SND1Q7KZF4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.82■□□□□ 0.66e-6■□□□□ 9.2
SND1Q7KZF4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.63■□□□□ 0.572e-7■□□□□ 9.2
SND1Q7KZF4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.576e-6■□□□□ 9.2
SND1Q7KZF4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.562e-7■□□□□ 9.2
SND1Q7KZF4 TSPAN3-208ENST00000560514 638 ntTSL 218.53■□□□□ 0.566e-6■□□□□ 9.2
SND1Q7KZF4 CLDN7-208ENST00000575313 605 ntTSL 318.53■□□□□ 0.562e-7■□□□□ 9.2
SND1Q7KZF4 H3F3B-209ENST00000589949 842 ntTSL 218.51■□□□□ 0.556e-27■□□□□ 9.2
SND1Q7KZF4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.552e-7■□□□□ 9.2
SND1Q7KZF4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.522e-7■□□□□ 9.2
SND1Q7KZF4 NDUFS8-208ENST00000526446 814 ntTSL 518.2■□□□□ 0.56e-6■□□□□ 9.2
SND1Q7KZF4 H3F3B-207ENST00000589417 575 ntTSL 218.17■□□□□ 0.56e-27■□□□□ 9.2
SND1Q7KZF4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.01■□□□□ 0.472e-7■□□□□ 9.2
SND1Q7KZF4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.01■□□□□ 0.476e-6■□□□□ 9.2
SND1Q7KZF4 CLDN7-207ENST00000574070 485 ntTSL 1 (best)17.94■□□□□ 0.462e-7■□□□□ 9.2
SND1Q7KZF4 GSTK1-208ENST00000489654 875 ntTSL 217.91■□□□□ 0.461e-9■□□□□ 9.2
SND1Q7KZF4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.9■□□□□ 0.466e-6■□□□□ 9.2
SND1Q7KZF4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.452e-7■□□□□ 9.2
SND1Q7KZF4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.82■□□□□ 0.443e-8■□□□□ 9.2
SND1Q7KZF4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.442e-7■□□□□ 9.2
SND1Q7KZF4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.446e-6■□□□□ 9.2
SND1Q7KZF4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.75■□□□□ 0.436e-6■□□□□ 9.2
SND1Q7KZF4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.426e-6■□□□□ 9.2
SND1Q7KZF4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.46e-27■□□□□ 9.2
SND1Q7KZF4 CLPTM1L-215ENST00000515719 382 ntTSL 217.42■□□□□ 0.382e-7■□□□□ 9.2
SND1Q7KZF4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.37■□□□□ 0.371e-9■□□□□ 9.2
SND1Q7KZF4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.376e-6■□□□□ 9.2
SND1Q7KZF4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.346e-6■□□□□ 9.2
SND1Q7KZF4 GSTK1-209ENST00000494735 832 ntTSL 217.16■□□□□ 0.341e-9■□□□□ 9.2
SND1Q7KZF4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.13■□□□□ 0.336e-6■□□□□ 9.2
SND1Q7KZF4 CLPTM1L-213ENST00000512451 341 ntTSL 516.78■□□□□ 0.282e-7■□□□□ 9.2
SND1Q7KZF4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.266e-6■□□□□ 9.2
SND1Q7KZF4 NDUFS8-202ENST00000432321 936 ntTSL 216.66■□□□□ 0.266e-6■□□□□ 9.2
SND1Q7KZF4 NCBP2-202ENST00000411704 564 ntTSL 516.6■□□□□ 0.256e-6■□□□□ 9.2
SND1Q7KZF4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.256e-6■□□□□ 9.2
SND1Q7KZF4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.47■□□□□ 0.236e-6■□□□□ 9.2
SND1Q7KZF4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.35■□□□□ 0.216e-6■□□□□ 9.2
SND1Q7KZF4 NDUFS8-203ENST00000453471 620 ntTSL 316.28■□□□□ 0.26e-6■□□□□ 9.2
SND1Q7KZF4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.166e-6■□□□□ 9.2
SND1Q7KZF4 OCIAD1-211ENST00000507210 582 ntTSL 315.87■□□□□ 0.137e-7■□□□□ 9.2
SND1Q7KZF4 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.74■□□□□ 0.116e-6■□□□□ 9.2
SND1Q7KZF4 NDUFS8-206ENST00000525628 515 ntTSL 215.65■□□□□ 0.16e-6■□□□□ 9.2
SND1Q7KZF4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.096e-6■□□□□ 9.2
SND1Q7KZF4 RNH1-214ENST00000529115 855 ntTSL 315.54■□□□□ 0.082e-7■□□□□ 9.2
SND1Q7KZF4 NDUFS8-212ENST00000531228 531 ntTSL 215.49■□□□□ 0.076e-6■□□□□ 9.2
SND1Q7KZF4 EMC4-207ENST00000558810 652 ntTSL 215.26■□□□□ 0.033e-8■□□□□ 9.2
SND1Q7KZF4 NDUFS8-215ENST00000532399 3072 ntTSL 215.12■□□□□ 0.016e-6■□□□□ 9.2
SND1Q7KZF4 NCBP2-211ENST00000468923 1096 ntTSL 215.04■□□□□ -06e-6■□□□□ 9.2
SND1Q7KZF4 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.01□□□□□ -0.016e-6■□□□□ 9.2
SND1Q7KZF4 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.016e-27■□□□□ 9.2
Retrieved 100 of 13,567 protein–RNA pairs in 465.1 ms