Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.89□□□□□ -1.472e-7■□□□□ 10
SRSF1Q07955 FCGR2C-203ENST00000467903 1101 ntTSL 311.43□□□□□ -0.583e-6■□□□□ 10
SRSF1Q07955 FCGR2C-210ENST00000508651 542 ntTSL 45.73□□□□□ -1.493e-6■□□□□ 10
SRSF1Q07955 FCGR2C-209ENST00000507374 553 ntTSL 45.13□□□□□ -1.593e-6■□□□□ 10
SRSF1Q07955 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.13□□□□□ -1.593e-6■□□□□ 10
SRSF1Q07955 MLXIPL-208ENST00000456640 706 ntTSL 515.78■□□□□ 0.129e-9■□□□□ 10
SRSF1Q07955 FAM169A-205ENST00000513277 803 ntTSL 318.28■□□□□ 0.523e-10■□□□□ 10
SRSF1Q07955 FAM169A-206ENST00000514200 751 ntTSL 416.78■□□□□ 0.283e-10■□□□□ 10
SRSF1Q07955 MYSM1-202ENST00000466774 560 ntTSL 316.18■□□□□ 0.183e-10■□□□□ 10
SRSF1Q07955 MYSM1-206ENST00000489282 698 ntTSL 216.18■□□□□ 0.183e-10■□□□□ 10
SRSF1Q07955 MYSM1-205ENST00000483003 378 ntTSL 1 (best)14.58□□□□□ -0.083e-10■□□□□ 10
SRSF1Q07955 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.39□□□□□ -0.271e-6■□□□□ 10
SRSF1Q07955 RBM5-207ENST00000438369 560 ntTSL 411.15□□□□□ -0.623e-10■□□□□ 10
SRSF1Q07955 RBM5-203ENST00000404526 580 ntTSL 311□□□□□ -0.653e-10■□□□□ 10
SRSF1Q07955 FAM169A-204ENST00000510609 5908 ntTSL 1 (best)10.71□□□□□ -0.73e-10■□□□□ 10
SRSF1Q07955 RBM5-208ENST00000441305 569 ntTSL 38.52□□□□□ -1.053e-10■□□□□ 10
SRSF1Q07955 RBM5-205ENST00000433556 567 ntTSL 48.22□□□□□ -1.093e-10■□□□□ 10
SRSF1Q07955 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.1□□□□□ -1.593e-10■□□□□ 10
SRSF1Q07955 RBM5-204ENST00000417905 427 ntTSL 54.66□□□□□ -1.663e-10■□□□□ 10
SRSF1Q07955 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.49□□□□□ -1.853e-10■□□□□ 10
SRSF1Q07955 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.863e-10■□□□□ 10
SRSF1Q07955 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.93e-10■□□□□ 10
SRSF1Q07955 SETD5-209ENST00000431285 1824 ntTSL 520.36■□□□□ 0.852e-7■□□□□ 10
SRSF1Q07955 SETD5-212ENST00000450326 921 ntTSL 314.81□□□□□ -0.042e-7■□□□□ 10
SRSF1Q07955 SETD5-226ENST00000490791 667 ntTSL 35.63□□□□□ -1.512e-7■□□□□ 10
SRSF1Q07955 HNRNPH1-231ENST00000519033 832 ntTSL 315.65■□□□□ 0.12e-10■□□□□ 10
SRSF1Q07955 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.77■□□□□ 0.123e-8■□□□□ 10
SRSF1Q07955 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.073e-8■□□□□ 10
SRSF1Q07955 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.073e-8■□□□□ 10
SRSF1Q07955 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC12.96□□□□□ -0.343e-8■□□□□ 10
SRSF1Q07955 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.91□□□□□ -0.343e-8■□□□□ 10
SRSF1Q07955 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC11.37□□□□□ -0.593e-8■□□□□ 10
SRSF1Q07955 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.63e-8■□□□□ 10
SRSF1Q07955 CTAGE5-213ENST00000555716 558 ntTSL 46.38□□□□□ -1.393e-7■□□□□ 10
SRSF1Q07955 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.81□□□□□ -1.643e-7■□□□□ 10
SRSF1Q07955 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.56□□□□□ -1.683e-7■□□□□ 10
SRSF1Q07955 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.52□□□□□ -1.693e-7■□□□□ 10
SRSF1Q07955 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.05□□□□□ -1.763e-7■□□□□ 10
SRSF1Q07955 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.763e-7■□□□□ 10
SRSF1Q07955 CTAGE5-211ENST00000554392 527 ntTSL 44.01□□□□□ -1.773e-7■□□□□ 10
SRSF1Q07955 KMT2E-211ENST00000480368 679 ntTSL 519.43■□□□□ 0.73e-6■□□□□ 10
SRSF1Q07955 DCAF11-222ENST00000559396 300 ntTSL 33.82□□□□□ -1.82e-8■□□□□ 10
SRSF1Q07955 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.179e-8■□□□□ 10
SRSF1Q07955 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.84□□□□□ -0.199e-8■□□□□ 10
SRSF1Q07955 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.379e-8■□□□□ 10
SRSF1Q07955 CFDP1-205ENST00000565646 608 ntTSL 311.75□□□□□ -0.539e-8■□□□□ 10
SRSF1Q07955 CFDP1-207ENST00000566901 1167 ntTSL 1 (best)11.15□□□□□ -0.629e-8■□□□□ 10
SRSF1Q07955 AC009163.4-202ENST00000561887 137 ntTSL 210.9□□□□□ -0.669e-8■□□□□ 10
SRSF1Q07955 AC009163.4-203ENST00000566594 254 ntTSL 210.9□□□□□ -0.669e-8■□□□□ 10
SRSF1Q07955 CFDP1-203ENST00000564286 775 ntTSL 510.78□□□□□ -0.689e-8■□□□□ 10
SRSF1Q07955 CFDP1-201ENST00000283882 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.739e-8■□□□□ 10
SRSF1Q07955 PPT2-EGFL8-207ENST00000585246 1051 ntAPPRIS ALT2 TSL 220.2■□□□□ 0.829e-7■□□□□ 10
SRSF1Q07955 PPT2-254ENST00000493548 790 ntTSL 519.18■□□□□ 0.669e-7■□□□□ 10
SRSF1Q07955 NADSYN1-208ENST00000527227 799 ntTSL 318.74■□□□□ 0.599e-7■□□□□ 10
SRSF1Q07955 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.589e-7■□□□□ 10
SRSF1Q07955 CDK10-207ENST00000504473 910 ntTSL 317.6■□□□□ 0.419e-7■□□□□ 10
SRSF1Q07955 CDK10-211ENST00000508723 555 ntTSL 317.26■□□□□ 0.359e-7■□□□□ 10
SRSF1Q07955 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.289e-7■□□□□ 10
SRSF1Q07955 PPT2-EGFL8-204ENST00000453656 1327 ntTSL 216.58■□□□□ 0.249e-7■□□□□ 10
SRSF1Q07955 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.199e-7■□□□□ 10
SRSF1Q07955 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.129e-7■□□□□ 10
SRSF1Q07955 CDK10-214ENST00000512912 658 ntTSL 515.23■□□□□ 0.039e-7■□□□□ 10
SRSF1Q07955 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.18■□□□□ 0.029e-7■□□□□ 10
SRSF1Q07955 CDK10-213ENST00000511415 707 ntTSL 314.79□□□□□ -0.049e-7■□□□□ 10
SRSF1Q07955 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.049e-7■□□□□ 10
SRSF1Q07955 CDK10-220ENST00000568456 1265 ntTSL 214.77□□□□□ -0.059e-7■□□□□ 10
SRSF1Q07955 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.059e-7■□□□□ 10
SRSF1Q07955 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.139e-7■□□□□ 10
SRSF1Q07955 TELO2-204ENST00000564507 903 ntTSL 313.95□□□□□ -0.189e-7■□□□□ 10
SRSF1Q07955 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.239e-7■□□□□ 10
SRSF1Q07955 TELO2-205ENST00000567423 479 ntTSL 513.09□□□□□ -0.319e-7■□□□□ 10
SRSF1Q07955 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.359e-7■□□□□ 10
SRSF1Q07955 COQ4-204ENST00000608951 781 ntTSL 2 BASIC12.64□□□□□ -0.399e-7■□□□□ 10
SRSF1Q07955 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.499e-7■□□□□ 10
SRSF1Q07955 NADSYN1-207ENST00000526039 769 ntTSL 511.44□□□□□ -0.589e-7■□□□□ 10
SRSF1Q07955 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11.31□□□□□ -0.69e-7■□□□□ 10
SRSF1Q07955 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.69e-7■□□□□ 10
SRSF1Q07955 CDK10-203ENST00000378277 576 ntTSL 211.24□□□□□ -0.619e-7■□□□□ 10
SRSF1Q07955 CPNE7-206ENST00000532500 550 ntTSL 310.98□□□□□ -0.655e-6■□□□□ 10
SRSF1Q07955 CDK10-205ENST00000502547 551 ntTSL 410.92□□□□□ -0.669e-7■□□□□ 10
SRSF1Q07955 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.689e-7■□□□□ 10
SRSF1Q07955 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.729e-7■□□□□ 10
SRSF1Q07955 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.739e-7■□□□□ 10
SRSF1Q07955 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.769e-7■□□□□ 10
SRSF1Q07955 NADSYN1-219ENST00000531236 3429 ntTSL 28.93□□□□□ -0.989e-7■□□□□ 10
SRSF1Q07955 CDK10-215ENST00000514965 474 ntTSL 38.57□□□□□ -1.049e-7■□□□□ 10
SRSF1Q07955 PPT2-EGFL8-205ENST00000479001 944 ntTSL 58.23□□□□□ -1.099e-7■□□□□ 10
SRSF1Q07955 SON-217ENST00000478183 1818 ntTSL 1 (best)7.37□□□□□ -1.239e-7■□□□□ 10
SRSF1Q07955 SON-213ENST00000473102 575 ntTSL 55.72□□□□□ -1.499e-7■□□□□ 10
SRSF1Q07955 SON-218ENST00000484294 500 ntTSL 55.72□□□□□ -1.499e-7■□□□□ 10
SRSF1Q07955 SON-210ENST00000465834 957 ntTSL 35.55□□□□□ -1.529e-7■□□□□ 10
SRSF1Q07955 SON-212ENST00000470533 798 ntTSL 55.38□□□□□ -1.559e-7■□□□□ 10
SRSF1Q07955 TOP2B-206ENST00000475717 540 ntTSL 45.28□□□□□ -1.569e-7■□□□□ 10
SRSF1Q07955 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.69e-7■□□□□ 10
SRSF1Q07955 SON-219ENST00000491794 995 ntTSL 25□□□□□ -1.619e-7■□□□□ 10
SRSF1Q07955 SON-211ENST00000467616 676 ntTSL 54.73□□□□□ -1.659e-7■□□□□ 10
SRSF1Q07955 TOP2B-202ENST00000413971 2049 ntTSL 54.54□□□□□ -1.689e-7■□□□□ 10
SRSF1Q07955 SON-216ENST00000477419 771 ntTSL 23.83□□□□□ -1.89e-7■□□□□ 10
SRSF1Q07955 ATP1B3-205ENST00000475483 734 ntTSL 314.05□□□□□ -0.167e-10■□□□□ 10
SRSF1Q07955 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.517e-10■□□□□ 10
Retrieved 100 of 14,836 protein–RNA pairs in 425.6 ms