Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
GPC6Q9Y625 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
GPC6Q9Y625 AC110285.7-201ENST00000624417 1536 ntBASIC23.18■■□□□ 1.3
GPC6Q9Y625 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.18■■□□□ 1.3
GPC6Q9Y625 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.18■■□□□ 1.3
GPC6Q9Y625 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
GPC6Q9Y625 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.18■■□□□ 1.3
GPC6Q9Y625 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.18■■□□□ 1.3
GPC6Q9Y625 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
GPC6Q9Y625 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
GPC6Q9Y625 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.17■■□□□ 1.3
GPC6Q9Y625 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.17■■□□□ 1.3
GPC6Q9Y625 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.17■■□□□ 1.3
GPC6Q9Y625 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
GPC6Q9Y625 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GPC6Q9Y625 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GPC6Q9Y625 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GPC6Q9Y625 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.16■■□□□ 1.3
GPC6Q9Y625 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
GPC6Q9Y625 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
GPC6Q9Y625 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.15■■□□□ 1.3
GPC6Q9Y625 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
GPC6Q9Y625 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
GPC6Q9Y625 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.14■■□□□ 1.29
GPC6Q9Y625 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.14■■□□□ 1.29
GPC6Q9Y625 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
GPC6Q9Y625 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
GPC6Q9Y625 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.13■■□□□ 1.29
GPC6Q9Y625 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
GPC6Q9Y625 DUX4L11-201ENST00000611504 1267 ntBASIC23.13■■□□□ 1.29
GPC6Q9Y625 DUX4L12-201ENST00000614593 1267 ntBASIC23.13■■□□□ 1.29
GPC6Q9Y625 DUX4L14-201ENST00000621227 1267 ntBASIC23.13■■□□□ 1.29
GPC6Q9Y625 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
GPC6Q9Y625 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
GPC6Q9Y625 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
GPC6Q9Y625 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
GPC6Q9Y625 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
GPC6Q9Y625 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.12■■□□□ 1.29
GPC6Q9Y625 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.11■■□□□ 1.29
GPC6Q9Y625 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.11■■□□□ 1.29
GPC6Q9Y625 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.1■■□□□ 1.29
GPC6Q9Y625 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
GPC6Q9Y625 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.1■■□□□ 1.29
GPC6Q9Y625 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.1■■□□□ 1.29
GPC6Q9Y625 DUX4L13-201ENST00000554103 1267 ntBASIC23.1■■□□□ 1.29
GPC6Q9Y625 DUX4L15-201ENST00000611059 1267 ntBASIC23.1■■□□□ 1.29
GPC6Q9Y625 DUX4L23-201ENST00000615195 1269 ntBASIC23.1■■□□□ 1.29
GPC6Q9Y625 DUX4L24-201ENST00000617576 1269 ntBASIC23.1■■□□□ 1.29
GPC6Q9Y625 DUX4L22-201ENST00000618238 1269 ntBASIC23.1■■□□□ 1.29
GPC6Q9Y625 DUX4L20-201ENST00000619712 1269 ntBASIC23.1■■□□□ 1.29
GPC6Q9Y625 DUX4L21-201ENST00000622058 1269 ntBASIC23.1■■□□□ 1.29
GPC6Q9Y625 DUX4L10-201ENST00000622460 1267 ntBASIC23.1■■□□□ 1.29
GPC6Q9Y625 DUX4L25-201ENST00000624915 1269 ntBASIC23.1■■□□□ 1.29
GPC6Q9Y625 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.1■■□□□ 1.29
GPC6Q9Y625 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
GPC6Q9Y625 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
GPC6Q9Y625 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
GPC6Q9Y625 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
GPC6Q9Y625 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.09■■□□□ 1.29
GPC6Q9Y625 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.09■■□□□ 1.29
GPC6Q9Y625 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
GPC6Q9Y625 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
GPC6Q9Y625 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
GPC6Q9Y625 AL449106.1-201ENST00000608517 1980 ntBASIC23.09■■□□□ 1.29
GPC6Q9Y625 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.08■■□□□ 1.29
GPC6Q9Y625 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
GPC6Q9Y625 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.08■■□□□ 1.29
GPC6Q9Y625 AC091060.1-201ENST00000623524 1766 ntBASIC23.08■■□□□ 1.29
GPC6Q9Y625 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
GPC6Q9Y625 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
GPC6Q9Y625 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.07■■□□□ 1.28
GPC6Q9Y625 MIR7108-201ENST00000614319 87 ntBASIC23.07■■□□□ 1.28
GPC6Q9Y625 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
GPC6Q9Y625 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
GPC6Q9Y625 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
GPC6Q9Y625 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
GPC6Q9Y625 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.06■■□□□ 1.28
GPC6Q9Y625 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.06■■□□□ 1.28
GPC6Q9Y625 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.06■■□□□ 1.28
GPC6Q9Y625 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
GPC6Q9Y625 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
GPC6Q9Y625 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
GPC6Q9Y625 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
GPC6Q9Y625 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
GPC6Q9Y625 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
GPC6Q9Y625 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.05■■□□□ 1.28
GPC6Q9Y625 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.05■■□□□ 1.28
GPC6Q9Y625 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
GPC6Q9Y625 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
GPC6Q9Y625 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.04■■□□□ 1.28
GPC6Q9Y625 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.04■■□□□ 1.28
GPC6Q9Y625 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.04■■□□□ 1.28
GPC6Q9Y625 AP004609.3-201ENST00000610705 1884 ntBASIC23.03■■□□□ 1.28
GPC6Q9Y625 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.03■■□□□ 1.28
GPC6Q9Y625 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
GPC6Q9Y625 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
GPC6Q9Y625 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.03■■□□□ 1.28
GPC6Q9Y625 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
GPC6Q9Y625 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
GPC6Q9Y625 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms