Protein–RNA interactions for Protein: Q9Y5H6

PCDHA8, Protocadherin alpha-8, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8Q9Y5H6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCDHA8Q9Y5H6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
PCDHA8Q9Y5H6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
PCDHA8Q9Y5H6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
PCDHA8Q9Y5H6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
PCDHA8Q9Y5H6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.52■■■□□ 2.16
PCDHA8Q9Y5H6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC28.52■■■□□ 2.16
PCDHA8Q9Y5H6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PCDHA8Q9Y5H6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PCDHA8Q9Y5H6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
PCDHA8Q9Y5H6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PCDHA8Q9Y5H6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PCDHA8Q9Y5H6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
PCDHA8Q9Y5H6 AC126177.7-201ENST00000547904 679 ntBASIC28.5■■■□□ 2.15
PCDHA8Q9Y5H6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
PCDHA8Q9Y5H6 RNF126P1-201ENST00000567452 1320 ntBASIC28.49■■■□□ 2.15
PCDHA8Q9Y5H6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
PCDHA8Q9Y5H6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.48■■■□□ 2.15
PCDHA8Q9Y5H6 WHAMMP3-201ENST00000611636 1609 ntBASIC28.48■■■□□ 2.15
PCDHA8Q9Y5H6 AL359258.2-201ENST00000564063 1566 ntBASIC28.48■■■□□ 2.15
PCDHA8Q9Y5H6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PCDHA8Q9Y5H6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
PCDHA8Q9Y5H6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
PCDHA8Q9Y5H6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCDHA8Q9Y5H6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCDHA8Q9Y5H6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCDHA8Q9Y5H6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
PCDHA8Q9Y5H6 AL449106.1-201ENST00000608517 1980 ntBASIC28.46■■■□□ 2.15
PCDHA8Q9Y5H6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
PCDHA8Q9Y5H6 RARRES2P2-201ENST00000394842 485 ntBASIC28.45■■■□□ 2.14
PCDHA8Q9Y5H6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.45■■■□□ 2.14
PCDHA8Q9Y5H6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.45■■■□□ 2.14
PCDHA8Q9Y5H6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PCDHA8Q9Y5H6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PCDHA8Q9Y5H6 AC092296.2-201ENST00000589470 999 ntBASIC28.44■■■□□ 2.14
PCDHA8Q9Y5H6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.42■■■□□ 2.14
PCDHA8Q9Y5H6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
PCDHA8Q9Y5H6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PCDHA8Q9Y5H6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
PCDHA8Q9Y5H6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
PCDHA8Q9Y5H6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
PCDHA8Q9Y5H6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCDHA8Q9Y5H6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCDHA8Q9Y5H6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCDHA8Q9Y5H6 AL157400.5-201ENST00000507624 621 ntBASIC28.4■■■□□ 2.14
PCDHA8Q9Y5H6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
PCDHA8Q9Y5H6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.4■■■□□ 2.14
PCDHA8Q9Y5H6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
PCDHA8Q9Y5H6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.4■■■□□ 2.14
PCDHA8Q9Y5H6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
PCDHA8Q9Y5H6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
PCDHA8Q9Y5H6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCDHA8Q9Y5H6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.38■■■□□ 2.13
PCDHA8Q9Y5H6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.38■■■□□ 2.13
PCDHA8Q9Y5H6 AL121749.1-202ENST00000609313 2153 ntBASIC28.38■■■□□ 2.13
PCDHA8Q9Y5H6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCDHA8Q9Y5H6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCDHA8Q9Y5H6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
PCDHA8Q9Y5H6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCDHA8Q9Y5H6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
PCDHA8Q9Y5H6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
PCDHA8Q9Y5H6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC28.36■■■□□ 2.13
PCDHA8Q9Y5H6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC28.36■■■□□ 2.13
PCDHA8Q9Y5H6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCDHA8Q9Y5H6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCDHA8Q9Y5H6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCDHA8Q9Y5H6 ECEL1P2-201ENST00000461596 1295 ntBASIC28.35■■■□□ 2.13
PCDHA8Q9Y5H6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PCDHA8Q9Y5H6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCDHA8Q9Y5H6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCDHA8Q9Y5H6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
PCDHA8Q9Y5H6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
PCDHA8Q9Y5H6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
PCDHA8Q9Y5H6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PCDHA8Q9Y5H6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC28.34■■■□□ 2.13
PCDHA8Q9Y5H6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
PCDHA8Q9Y5H6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
PCDHA8Q9Y5H6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.33■■■□□ 2.13
PCDHA8Q9Y5H6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHA8Q9Y5H6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.32■■■□□ 2.12
PCDHA8Q9Y5H6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.32■■■□□ 2.12
PCDHA8Q9Y5H6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHA8Q9Y5H6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHA8Q9Y5H6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHA8Q9Y5H6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
PCDHA8Q9Y5H6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.31■■■□□ 2.12
PCDHA8Q9Y5H6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
PCDHA8Q9Y5H6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PCDHA8Q9Y5H6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.3■■■□□ 2.12
PCDHA8Q9Y5H6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
PCDHA8Q9Y5H6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC28.3■■■□□ 2.12
PCDHA8Q9Y5H6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
PCDHA8Q9Y5H6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
PCDHA8Q9Y5H6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PCDHA8Q9Y5H6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PCDHA8Q9Y5H6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC28.28■■■□□ 2.12
PCDHA8Q9Y5H6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
PCDHA8Q9Y5H6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCDHA8Q9Y5H6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
PCDHA8Q9Y5H6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 148.7 ms