Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGB6Q9Y5F9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGB6Q9Y5F9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGB6Q9Y5F9 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGB6Q9Y5F9 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
PCDHGB6Q9Y5F9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGB6Q9Y5F9 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGB6Q9Y5F9 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
PCDHGB6Q9Y5F9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGB6Q9Y5F9 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHGB6Q9Y5F9 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGB6Q9Y5F9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHGB6Q9Y5F9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.18■■□□□ 1.3
PCDHGB6Q9Y5F9 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGB6Q9Y5F9 AC060814.1-201ENST00000554326 538 ntBASIC23.18■■□□□ 1.3
PCDHGB6Q9Y5F9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGB6Q9Y5F9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGB6Q9Y5F9 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGB6Q9Y5F9 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGB6Q9Y5F9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGB6Q9Y5F9 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGB6Q9Y5F9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHGB6Q9Y5F9 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGB6Q9Y5F9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
PCDHGB6Q9Y5F9 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGB6Q9Y5F9 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
PCDHGB6Q9Y5F9 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGB6Q9Y5F9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGB6Q9Y5F9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGB6Q9Y5F9 AC100797.4-201ENST00000631653 1827 ntBASIC23.15■■□□□ 1.3
PCDHGB6Q9Y5F9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHGB6Q9Y5F9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGB6Q9Y5F9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGB6Q9Y5F9 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGB6Q9Y5F9 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGB6Q9Y5F9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGB6Q9Y5F9 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
PCDHGB6Q9Y5F9 AC126177.7-201ENST00000547904 679 ntBASIC23.13■■□□□ 1.29
PCDHGB6Q9Y5F9 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDHGB6Q9Y5F9 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGB6Q9Y5F9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
PCDHGB6Q9Y5F9 AP002414.2-202ENST00000590929 1450 ntBASIC23.12■■□□□ 1.29
PCDHGB6Q9Y5F9 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDHGB6Q9Y5F9 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGB6Q9Y5F9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGB6Q9Y5F9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGB6Q9Y5F9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
PCDHGB6Q9Y5F9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGB6Q9Y5F9 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
PCDHGB6Q9Y5F9 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGB6Q9Y5F9 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHGB6Q9Y5F9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PCDHGB6Q9Y5F9 NTF6A-201ENST00000591175 560 ntBASIC23.1■■□□□ 1.29
PCDHGB6Q9Y5F9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGB6Q9Y5F9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHGB6Q9Y5F9 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGB6Q9Y5F9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHGB6Q9Y5F9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGB6Q9Y5F9 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGB6Q9Y5F9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGB6Q9Y5F9 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGB6Q9Y5F9 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGB6Q9Y5F9 AC092296.2-201ENST00000589470 999 ntBASIC23.09■■□□□ 1.29
PCDHGB6Q9Y5F9 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGB6Q9Y5F9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGB6Q9Y5F9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGB6Q9Y5F9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.07■■□□□ 1.28
PCDHGB6Q9Y5F9 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDHGB6Q9Y5F9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGB6Q9Y5F9 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGB6Q9Y5F9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGB6Q9Y5F9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGB6Q9Y5F9 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGB6Q9Y5F9 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGB6Q9Y5F9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGB6Q9Y5F9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGB6Q9Y5F9 ECEL1P2-201ENST00000461596 1295 ntBASIC23.05■■□□□ 1.28
PCDHGB6Q9Y5F9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
PCDHGB6Q9Y5F9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDHGB6Q9Y5F9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGB6Q9Y5F9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHGB6Q9Y5F9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGB6Q9Y5F9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDHGB6Q9Y5F9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHGB6Q9Y5F9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGB6Q9Y5F9 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHGB6Q9Y5F9 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGB6Q9Y5F9 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHGB6Q9Y5F9 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.03■■□□□ 1.28
PCDHGB6Q9Y5F9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGB6Q9Y5F9 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGB6Q9Y5F9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDHGB6Q9Y5F9 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
PCDHGB6Q9Y5F9 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGB6Q9Y5F9 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
PCDHGB6Q9Y5F9 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGB6Q9Y5F9 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGB6Q9Y5F9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGB6Q9Y5F9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
PCDHGB6Q9Y5F9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms