Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHB13Q9Y5F0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
PCDHB13Q9Y5F0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHB13Q9Y5F0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.34■■□□□ 1.97
PCDHB13Q9Y5F0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC27.34■■□□□ 1.97
PCDHB13Q9Y5F0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHB13Q9Y5F0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
PCDHB13Q9Y5F0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHB13Q9Y5F0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC27.33■■□□□ 1.97
PCDHB13Q9Y5F0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC27.33■■□□□ 1.97
PCDHB13Q9Y5F0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.33■■□□□ 1.97
PCDHB13Q9Y5F0 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.33■■□□□ 1.96
PCDHB13Q9Y5F0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHB13Q9Y5F0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
PCDHB13Q9Y5F0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHB13Q9Y5F0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHB13Q9Y5F0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
PCDHB13Q9Y5F0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
PCDHB13Q9Y5F0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHB13Q9Y5F0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
PCDHB13Q9Y5F0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHB13Q9Y5F0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHB13Q9Y5F0 AC126177.7-201ENST00000547904 679 ntBASIC27.3■■□□□ 1.96
PCDHB13Q9Y5F0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHB13Q9Y5F0 AL359258.2-201ENST00000564063 1566 ntBASIC27.3■■□□□ 1.96
PCDHB13Q9Y5F0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC27.29■■□□□ 1.96
PCDHB13Q9Y5F0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC27.29■■□□□ 1.96
PCDHB13Q9Y5F0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC27.29■■□□□ 1.96
PCDHB13Q9Y5F0 MED25-210ENST00000612854 801 ntTSL 5 BASIC27.29■■□□□ 1.96
PCDHB13Q9Y5F0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHB13Q9Y5F0 MED25-214ENST00000622402 642 ntTSL 5 BASIC27.29■■□□□ 1.96
PCDHB13Q9Y5F0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHB13Q9Y5F0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC27.28■■□□□ 1.96
PCDHB13Q9Y5F0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHB13Q9Y5F0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHB13Q9Y5F0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHB13Q9Y5F0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHB13Q9Y5F0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC27.27■■□□□ 1.96
PCDHB13Q9Y5F0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHB13Q9Y5F0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHB13Q9Y5F0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHB13Q9Y5F0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHB13Q9Y5F0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHB13Q9Y5F0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHB13Q9Y5F0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.25■■□□□ 1.95
PCDHB13Q9Y5F0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC27.25■■□□□ 1.95
PCDHB13Q9Y5F0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
PCDHB13Q9Y5F0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC27.25■■□□□ 1.95
PCDHB13Q9Y5F0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHB13Q9Y5F0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHB13Q9Y5F0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHB13Q9Y5F0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHB13Q9Y5F0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHB13Q9Y5F0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.24■■□□□ 1.95
PCDHB13Q9Y5F0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.23■■□□□ 1.95
PCDHB13Q9Y5F0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC27.23■■□□□ 1.95
PCDHB13Q9Y5F0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
PCDHB13Q9Y5F0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHB13Q9Y5F0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHB13Q9Y5F0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHB13Q9Y5F0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
PCDHB13Q9Y5F0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.21■■□□□ 1.95
PCDHB13Q9Y5F0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHB13Q9Y5F0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.21■■□□□ 1.95
PCDHB13Q9Y5F0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHB13Q9Y5F0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHB13Q9Y5F0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.21■■□□□ 1.95
PCDHB13Q9Y5F0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.21■■□□□ 1.95
PCDHB13Q9Y5F0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHB13Q9Y5F0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHB13Q9Y5F0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC27.2■■□□□ 1.95
PCDHB13Q9Y5F0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.2■■□□□ 1.94
PCDHB13Q9Y5F0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHB13Q9Y5F0 AP004609.3-201ENST00000610705 1884 ntBASIC27.19■■□□□ 1.94
PCDHB13Q9Y5F0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHB13Q9Y5F0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHB13Q9Y5F0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.18■■□□□ 1.94
PCDHB13Q9Y5F0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDHB13Q9Y5F0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHB13Q9Y5F0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHB13Q9Y5F0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHB13Q9Y5F0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHB13Q9Y5F0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC27.17■■□□□ 1.94
PCDHB13Q9Y5F0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHB13Q9Y5F0 AC142472.1-201ENST00000612013 1741 ntBASIC27.16■■□□□ 1.94
PCDHB13Q9Y5F0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHB13Q9Y5F0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHB13Q9Y5F0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC27.15■■□□□ 1.94
PCDHB13Q9Y5F0 AC060814.1-201ENST00000554326 538 ntBASIC27.15■■□□□ 1.94
PCDHB13Q9Y5F0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC27.15■■□□□ 1.94
PCDHB13Q9Y5F0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC27.14■■□□□ 1.94
PCDHB13Q9Y5F0 AC022413.1-201ENST00000624602 984 ntBASIC27.14■■□□□ 1.94
PCDHB13Q9Y5F0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
PCDHB13Q9Y5F0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHB13Q9Y5F0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHB13Q9Y5F0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHB13Q9Y5F0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHB13Q9Y5F0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.12■■□□□ 1.93
PCDHB13Q9Y5F0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHB13Q9Y5F0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms