Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCDHA6Q9UN73 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
PCDHA6Q9UN73 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
PCDHA6Q9UN73 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
PCDHA6Q9UN73 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
PCDHA6Q9UN73 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.52■■■□□ 2.16
PCDHA6Q9UN73 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC28.52■■■□□ 2.16
PCDHA6Q9UN73 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PCDHA6Q9UN73 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PCDHA6Q9UN73 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
PCDHA6Q9UN73 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PCDHA6Q9UN73 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PCDHA6Q9UN73 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
PCDHA6Q9UN73 AC126177.7-201ENST00000547904 679 ntBASIC28.5■■■□□ 2.15
PCDHA6Q9UN73 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
PCDHA6Q9UN73 RNF126P1-201ENST00000567452 1320 ntBASIC28.49■■■□□ 2.15
PCDHA6Q9UN73 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
PCDHA6Q9UN73 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.48■■■□□ 2.15
PCDHA6Q9UN73 WHAMMP3-201ENST00000611636 1609 ntBASIC28.48■■■□□ 2.15
PCDHA6Q9UN73 AL359258.2-201ENST00000564063 1566 ntBASIC28.48■■■□□ 2.15
PCDHA6Q9UN73 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PCDHA6Q9UN73 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
PCDHA6Q9UN73 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
PCDHA6Q9UN73 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCDHA6Q9UN73 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCDHA6Q9UN73 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCDHA6Q9UN73 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
PCDHA6Q9UN73 AL449106.1-201ENST00000608517 1980 ntBASIC28.46■■■□□ 2.15
PCDHA6Q9UN73 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
PCDHA6Q9UN73 RARRES2P2-201ENST00000394842 485 ntBASIC28.45■■■□□ 2.14
PCDHA6Q9UN73 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.45■■■□□ 2.14
PCDHA6Q9UN73 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.45■■■□□ 2.14
PCDHA6Q9UN73 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PCDHA6Q9UN73 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PCDHA6Q9UN73 AC092296.2-201ENST00000589470 999 ntBASIC28.44■■■□□ 2.14
PCDHA6Q9UN73 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.42■■■□□ 2.14
PCDHA6Q9UN73 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
PCDHA6Q9UN73 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PCDHA6Q9UN73 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
PCDHA6Q9UN73 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
PCDHA6Q9UN73 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
PCDHA6Q9UN73 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCDHA6Q9UN73 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCDHA6Q9UN73 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCDHA6Q9UN73 AL157400.5-201ENST00000507624 621 ntBASIC28.4■■■□□ 2.14
PCDHA6Q9UN73 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
PCDHA6Q9UN73 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.4■■■□□ 2.14
PCDHA6Q9UN73 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
PCDHA6Q9UN73 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.4■■■□□ 2.14
PCDHA6Q9UN73 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
PCDHA6Q9UN73 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
PCDHA6Q9UN73 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCDHA6Q9UN73 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.38■■■□□ 2.13
PCDHA6Q9UN73 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.38■■■□□ 2.13
PCDHA6Q9UN73 AL121749.1-202ENST00000609313 2153 ntBASIC28.38■■■□□ 2.13
PCDHA6Q9UN73 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCDHA6Q9UN73 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCDHA6Q9UN73 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
PCDHA6Q9UN73 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCDHA6Q9UN73 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
PCDHA6Q9UN73 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
PCDHA6Q9UN73 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC28.36■■■□□ 2.13
PCDHA6Q9UN73 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC28.36■■■□□ 2.13
PCDHA6Q9UN73 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCDHA6Q9UN73 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCDHA6Q9UN73 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCDHA6Q9UN73 ECEL1P2-201ENST00000461596 1295 ntBASIC28.35■■■□□ 2.13
PCDHA6Q9UN73 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PCDHA6Q9UN73 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCDHA6Q9UN73 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCDHA6Q9UN73 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
PCDHA6Q9UN73 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
PCDHA6Q9UN73 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
PCDHA6Q9UN73 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PCDHA6Q9UN73 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC28.34■■■□□ 2.13
PCDHA6Q9UN73 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
PCDHA6Q9UN73 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
PCDHA6Q9UN73 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.33■■■□□ 2.13
PCDHA6Q9UN73 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHA6Q9UN73 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.32■■■□□ 2.12
PCDHA6Q9UN73 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.32■■■□□ 2.12
PCDHA6Q9UN73 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHA6Q9UN73 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHA6Q9UN73 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHA6Q9UN73 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
PCDHA6Q9UN73 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.31■■■□□ 2.12
PCDHA6Q9UN73 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
PCDHA6Q9UN73 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PCDHA6Q9UN73 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.3■■■□□ 2.12
PCDHA6Q9UN73 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
PCDHA6Q9UN73 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC28.3■■■□□ 2.12
PCDHA6Q9UN73 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
PCDHA6Q9UN73 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
PCDHA6Q9UN73 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PCDHA6Q9UN73 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PCDHA6Q9UN73 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC28.28■■■□□ 2.12
PCDHA6Q9UN73 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
PCDHA6Q9UN73 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCDHA6Q9UN73 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
PCDHA6Q9UN73 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms