Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC16.97■□□□□ 0.31
CDC42SE2Q9NRR3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDC42SE2Q9NRR3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC42SE2Q9NRR3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDC42SE2Q9NRR3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC42SE2Q9NRR3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDC42SE2Q9NRR3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC42SE2Q9NRR3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC42SE2Q9NRR3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDC42SE2Q9NRR3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC42SE2Q9NRR3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC42SE2Q9NRR3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC42SE2Q9NRR3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC42SE2Q9NRR3 AC087741.3-201ENST00000624270 1347 ntBASIC16.96■□□□□ 0.3
CDC42SE2Q9NRR3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CDC42SE2Q9NRR3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDC42SE2Q9NRR3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDC42SE2Q9NRR3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDC42SE2Q9NRR3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDC42SE2Q9NRR3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDC42SE2Q9NRR3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDC42SE2Q9NRR3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDC42SE2Q9NRR3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDC42SE2Q9NRR3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.94■□□□□ 0.3
CDC42SE2Q9NRR3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDC42SE2Q9NRR3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDC42SE2Q9NRR3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDC42SE2Q9NRR3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC42SE2Q9NRR3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDC42SE2Q9NRR3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC16.93■□□□□ 0.3
CDC42SE2Q9NRR3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDC42SE2Q9NRR3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC42SE2Q9NRR3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC16.93■□□□□ 0.3
CDC42SE2Q9NRR3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC42SE2Q9NRR3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC42SE2Q9NRR3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42SE2Q9NRR3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42SE2Q9NRR3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC16.92■□□□□ 0.3
CDC42SE2Q9NRR3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42SE2Q9NRR3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CDC42SE2Q9NRR3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42SE2Q9NRR3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC16.92■□□□□ 0.3
CDC42SE2Q9NRR3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.92■□□□□ 0.3
CDC42SE2Q9NRR3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC42SE2Q9NRR3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42SE2Q9NRR3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC16.91■□□□□ 0.3
CDC42SE2Q9NRR3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC42SE2Q9NRR3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42SE2Q9NRR3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC16.9■□□□□ 0.3
CDC42SE2Q9NRR3 AC044849.2-201ENST00000606596 710 ntBASIC16.9■□□□□ 0.3
CDC42SE2Q9NRR3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42SE2Q9NRR3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CDC42SE2Q9NRR3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42SE2Q9NRR3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42SE2Q9NRR3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDC42SE2Q9NRR3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.3
CDC42SE2Q9NRR3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42SE2Q9NRR3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42SE2Q9NRR3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42SE2Q9NRR3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC16.89■□□□□ 0.29
CDC42SE2Q9NRR3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC16.89■□□□□ 0.29
CDC42SE2Q9NRR3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42SE2Q9NRR3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42SE2Q9NRR3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42SE2Q9NRR3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42SE2Q9NRR3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC16.89■□□□□ 0.29
CDC42SE2Q9NRR3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDC42SE2Q9NRR3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CDC42SE2Q9NRR3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC42SE2Q9NRR3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDC42SE2Q9NRR3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDC42SE2Q9NRR3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42SE2Q9NRR3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42SE2Q9NRR3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC16.87■□□□□ 0.29
CDC42SE2Q9NRR3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42SE2Q9NRR3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42SE2Q9NRR3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC16.87■□□□□ 0.29
CDC42SE2Q9NRR3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC16.87■□□□□ 0.29
CDC42SE2Q9NRR3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
CDC42SE2Q9NRR3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42SE2Q9NRR3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDC42SE2Q9NRR3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42SE2Q9NRR3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42SE2Q9NRR3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42SE2Q9NRR3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CDC42SE2Q9NRR3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC16.86■□□□□ 0.29
CDC42SE2Q9NRR3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42SE2Q9NRR3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42SE2Q9NRR3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CDC42SE2Q9NRR3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42SE2Q9NRR3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42SE2Q9NRR3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CDC42SE2Q9NRR3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42SE2Q9NRR3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42SE2Q9NRR3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC16.86■□□□□ 0.29
CDC42SE2Q9NRR3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC42SE2Q9NRR3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC42SE2Q9NRR3 AL162393.1-201ENST00000437852 946 ntBASIC16.85■□□□□ 0.29
CDC42SE2Q9NRR3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC16.85■□□□□ 0.29
CDC42SE2Q9NRR3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms