Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.41■■□□□ 1.34
MKKSQ9NPJ1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.41■■□□□ 1.34
MKKSQ9NPJ1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.41■■□□□ 1.34
MKKSQ9NPJ1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
MKKSQ9NPJ1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.4■■□□□ 1.34
MKKSQ9NPJ1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
MKKSQ9NPJ1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.4■■□□□ 1.34
MKKSQ9NPJ1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.4■■□□□ 1.34
MKKSQ9NPJ1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
MKKSQ9NPJ1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
MKKSQ9NPJ1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
MKKSQ9NPJ1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
MKKSQ9NPJ1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
MKKSQ9NPJ1 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.38■■□□□ 1.33
MKKSQ9NPJ1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
MKKSQ9NPJ1 WHAMMP3-201ENST00000611636 1609 ntBASIC23.38■■□□□ 1.33
MKKSQ9NPJ1 LINC01003-201ENST00000564834 1764 ntBASIC23.38■■□□□ 1.33
MKKSQ9NPJ1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
MKKSQ9NPJ1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
MKKSQ9NPJ1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
MKKSQ9NPJ1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
MKKSQ9NPJ1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.37■■□□□ 1.33
MKKSQ9NPJ1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
MKKSQ9NPJ1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.36■■□□□ 1.33
MKKSQ9NPJ1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.36■■□□□ 1.33
MKKSQ9NPJ1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
MKKSQ9NPJ1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
MKKSQ9NPJ1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MKKSQ9NPJ1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MKKSQ9NPJ1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MKKSQ9NPJ1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
MKKSQ9NPJ1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.33■■□□□ 1.33
MKKSQ9NPJ1 SMPD5-203ENST00000639008 1464 ntBASIC23.33■■□□□ 1.33
MKKSQ9NPJ1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
MKKSQ9NPJ1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.33■■□□□ 1.33
MKKSQ9NPJ1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
MKKSQ9NPJ1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
MKKSQ9NPJ1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.33■■□□□ 1.32
MKKSQ9NPJ1 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MKKSQ9NPJ1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.32■■□□□ 1.32
MKKSQ9NPJ1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
MKKSQ9NPJ1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.32■■□□□ 1.32
MKKSQ9NPJ1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MKKSQ9NPJ1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
MKKSQ9NPJ1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.31■■□□□ 1.32
MKKSQ9NPJ1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
MKKSQ9NPJ1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
MKKSQ9NPJ1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MKKSQ9NPJ1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.31■■□□□ 1.32
MKKSQ9NPJ1 BX255925.1-201ENST00000566954 1854 ntBASIC23.3■■□□□ 1.32
MKKSQ9NPJ1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.3■■□□□ 1.32
MKKSQ9NPJ1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
MKKSQ9NPJ1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MKKSQ9NPJ1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
MKKSQ9NPJ1 AC025884.2-201ENST00000553429 711 ntBASIC23.3■■□□□ 1.32
MKKSQ9NPJ1 AC007029.1-201ENST00000604183 313 ntBASIC23.3■■□□□ 1.32
MKKSQ9NPJ1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
MKKSQ9NPJ1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MKKSQ9NPJ1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
MKKSQ9NPJ1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
MKKSQ9NPJ1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MKKSQ9NPJ1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MKKSQ9NPJ1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.29■■□□□ 1.32
MKKSQ9NPJ1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.29■■□□□ 1.32
MKKSQ9NPJ1 NTF6A-201ENST00000591175 560 ntBASIC23.29■■□□□ 1.32
MKKSQ9NPJ1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
MKKSQ9NPJ1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
MKKSQ9NPJ1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.29■■□□□ 1.32
MKKSQ9NPJ1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
MKKSQ9NPJ1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.28■■□□□ 1.32
MKKSQ9NPJ1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MKKSQ9NPJ1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.28■■□□□ 1.32
MKKSQ9NPJ1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.27■■□□□ 1.32
MKKSQ9NPJ1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
MKKSQ9NPJ1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
MKKSQ9NPJ1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.27■■□□□ 1.32
MKKSQ9NPJ1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
MKKSQ9NPJ1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
MKKSQ9NPJ1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
MKKSQ9NPJ1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.26■■□□□ 1.31
MKKSQ9NPJ1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
MKKSQ9NPJ1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
MKKSQ9NPJ1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
MKKSQ9NPJ1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
MKKSQ9NPJ1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
MKKSQ9NPJ1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
MKKSQ9NPJ1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MKKSQ9NPJ1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
MKKSQ9NPJ1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.24■■□□□ 1.31
MKKSQ9NPJ1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
MKKSQ9NPJ1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.24■■□□□ 1.31
MKKSQ9NPJ1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
MKKSQ9NPJ1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MKKSQ9NPJ1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MKKSQ9NPJ1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
MKKSQ9NPJ1 U85056.1-201ENST00000616429 682 ntBASIC23.23■■□□□ 1.31
MKKSQ9NPJ1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
MKKSQ9NPJ1 AL359504.2-201ENST00000605506 1601 ntBASIC23.22■■□□□ 1.31
MKKSQ9NPJ1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
MKKSQ9NPJ1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms