Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
RC3H2Q9HBD1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RC3H2Q9HBD1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.84■■□□□ 1.89
RC3H2Q9HBD1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.84■■□□□ 1.89
RC3H2Q9HBD1 ABCB10P3-201ENST00000561950 2166 ntBASIC26.84■■□□□ 1.89
RC3H2Q9HBD1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
RC3H2Q9HBD1 AP002414.2-202ENST00000590929 1450 ntBASIC26.83■■□□□ 1.89
RC3H2Q9HBD1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RC3H2Q9HBD1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.83■■□□□ 1.89
RC3H2Q9HBD1 AC103834.1-201ENST00000520383 144 ntBASIC26.83■■□□□ 1.89
RC3H2Q9HBD1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.83■■□□□ 1.89
RC3H2Q9HBD1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RC3H2Q9HBD1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RC3H2Q9HBD1 MIR6765-201ENST00000614092 87 ntBASIC26.82■■□□□ 1.88
RC3H2Q9HBD1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RC3H2Q9HBD1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
RC3H2Q9HBD1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RC3H2Q9HBD1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RC3H2Q9HBD1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.81■■□□□ 1.88
RC3H2Q9HBD1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
RC3H2Q9HBD1 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
RC3H2Q9HBD1 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RC3H2Q9HBD1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.8■■□□□ 1.88
RC3H2Q9HBD1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RC3H2Q9HBD1 BHLHE23-202ENST00000612929 1109 ntBASIC26.8■■□□□ 1.88
RC3H2Q9HBD1 PVT1_1.1-201ENST00000615125 194 ntBASIC26.8■■□□□ 1.88
RC3H2Q9HBD1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
RC3H2Q9HBD1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RC3H2Q9HBD1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.79■■□□□ 1.88
RC3H2Q9HBD1 KRT8P33-201ENST00000508125 1423 ntBASIC26.79■■□□□ 1.88
RC3H2Q9HBD1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RC3H2Q9HBD1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
RC3H2Q9HBD1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
RC3H2Q9HBD1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RC3H2Q9HBD1 AC009299.2-201ENST00000482477 511 ntBASIC26.78■■□□□ 1.88
RC3H2Q9HBD1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.78■■□□□ 1.88
RC3H2Q9HBD1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RC3H2Q9HBD1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
RC3H2Q9HBD1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RC3H2Q9HBD1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RC3H2Q9HBD1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RC3H2Q9HBD1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC26.76■■□□□ 1.87
RC3H2Q9HBD1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RC3H2Q9HBD1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RC3H2Q9HBD1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
RC3H2Q9HBD1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RC3H2Q9HBD1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.76■■□□□ 1.87
RC3H2Q9HBD1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RC3H2Q9HBD1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.76■■□□□ 1.87
RC3H2Q9HBD1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.75■■□□□ 1.87
RC3H2Q9HBD1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.75■■□□□ 1.87
RC3H2Q9HBD1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
RC3H2Q9HBD1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RC3H2Q9HBD1 AC139795.1-202ENST00000500444 432 ntBASIC26.74■■□□□ 1.87
RC3H2Q9HBD1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC26.74■■□□□ 1.87
RC3H2Q9HBD1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.74■■□□□ 1.87
RC3H2Q9HBD1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RC3H2Q9HBD1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RC3H2Q9HBD1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RC3H2Q9HBD1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26.73■■□□□ 1.87
RC3H2Q9HBD1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RC3H2Q9HBD1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.72■■□□□ 1.87
RC3H2Q9HBD1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC26.72■■□□□ 1.87
RC3H2Q9HBD1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RC3H2Q9HBD1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.72■■□□□ 1.87
RC3H2Q9HBD1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.72■■□□□ 1.87
RC3H2Q9HBD1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RC3H2Q9HBD1 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
RC3H2Q9HBD1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RC3H2Q9HBD1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.7■■□□□ 1.86
RC3H2Q9HBD1 MIR4508-201ENST00000584178 70 ntBASIC26.7■■□□□ 1.86
RC3H2Q9HBD1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.7■■□□□ 1.86
RC3H2Q9HBD1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
RC3H2Q9HBD1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RC3H2Q9HBD1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RC3H2Q9HBD1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
RC3H2Q9HBD1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.69■■□□□ 1.86
RC3H2Q9HBD1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.69■■□□□ 1.86
RC3H2Q9HBD1 AC018755.3-202ENST00000596210 929 ntBASIC26.69■■□□□ 1.86
RC3H2Q9HBD1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RC3H2Q9HBD1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.68■■□□□ 1.86
RC3H2Q9HBD1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.68■■□□□ 1.86
RC3H2Q9HBD1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RC3H2Q9HBD1 AL359504.2-201ENST00000605506 1601 ntBASIC26.68■■□□□ 1.86
RC3H2Q9HBD1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.68■■□□□ 1.86
RC3H2Q9HBD1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
RC3H2Q9HBD1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.67■■□□□ 1.86
RC3H2Q9HBD1 YBX1P4-201ENST00000392794 808 ntBASIC26.67■■□□□ 1.86
RC3H2Q9HBD1 AL592295.1-201ENST00000400984 884 ntBASIC26.67■■□□□ 1.86
RC3H2Q9HBD1 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.67■■□□□ 1.86
RC3H2Q9HBD1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
RC3H2Q9HBD1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
RC3H2Q9HBD1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RC3H2Q9HBD1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RC3H2Q9HBD1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.66■■□□□ 1.86
RC3H2Q9HBD1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RC3H2Q9HBD1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.66■■□□□ 1.86
RC3H2Q9HBD1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.66■■□□□ 1.86
RC3H2Q9HBD1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RC3H2Q9HBD1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms