Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC37.91■■■■□ 3.66
PTPN23Q9H3S7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC37.91■■■■□ 3.66
PTPN23Q9H3S7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
PTPN23Q9H3S7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC37.9■■■■□ 3.66
PTPN23Q9H3S7 AC093536.1-201ENST00000569153 554 ntBASIC37.9■■■■□ 3.66
PTPN23Q9H3S7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC37.89■■■■□ 3.66
PTPN23Q9H3S7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC37.89■■■■□ 3.66
PTPN23Q9H3S7 WHAMMP3-201ENST00000611636 1609 ntBASIC37.89■■■■□ 3.66
PTPN23Q9H3S7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC37.89■■■■□ 3.66
PTPN23Q9H3S7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC37.89■■■■□ 3.66
PTPN23Q9H3S7 HES4-204ENST00000484667 667 ntTSL 3 BASIC37.88■■■■□ 3.65
PTPN23Q9H3S7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC37.88■■■■□ 3.65
PTPN23Q9H3S7 AC004987.1-201ENST00000428627 508 ntBASIC37.87■■■■□ 3.65
PTPN23Q9H3S7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC37.86■■■■□ 3.65
PTPN23Q9H3S7 RAP2CP1-202ENST00000605179 643 ntBASIC37.86■■■■□ 3.65
PTPN23Q9H3S7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC37.85■■■■□ 3.65
PTPN23Q9H3S7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
PTPN23Q9H3S7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC37.85■■■■□ 3.65
PTPN23Q9H3S7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC37.85■■■■□ 3.65
PTPN23Q9H3S7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC37.84■■■■□ 3.65
PTPN23Q9H3S7 AC129492.7-201ENST00000622992 756 ntBASIC37.84■■■■□ 3.65
PTPN23Q9H3S7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC37.84■■■■□ 3.65
PTPN23Q9H3S7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC37.83■■■■□ 3.65
PTPN23Q9H3S7 TSPY13P-201ENST00000338964 914 ntBASIC37.83■■■■□ 3.65
PTPN23Q9H3S7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC37.83■■■■□ 3.65
PTPN23Q9H3S7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC37.83■■■■□ 3.65
PTPN23Q9H3S7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC37.83■■■■□ 3.65
PTPN23Q9H3S7 AC026202.3-201ENST00000600805 1127 ntBASIC37.83■■■■□ 3.65
PTPN23Q9H3S7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC37.82■■■■□ 3.65
PTPN23Q9H3S7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC37.82■■■■□ 3.64
PTPN23Q9H3S7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC37.82■■■■□ 3.64
PTPN23Q9H3S7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC37.82■■■■□ 3.64
PTPN23Q9H3S7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC37.81■■■■□ 3.64
PTPN23Q9H3S7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
PTPN23Q9H3S7 AC139426.1-201ENST00000568218 2529 ntBASIC37.81■■■■□ 3.64
PTPN23Q9H3S7 ATP5G2P3-201ENST00000429083 425 ntBASIC37.8■■■■□ 3.64
PTPN23Q9H3S7 RP9P-202ENST00000450133 1212 ntBASIC37.8■■■■□ 3.64
PTPN23Q9H3S7 AC133552.2-201ENST00000619106 1032 ntBASIC37.8■■■■□ 3.64
PTPN23Q9H3S7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC37.8■■■■□ 3.64
PTPN23Q9H3S7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC37.8■■■■□ 3.64
PTPN23Q9H3S7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
PTPN23Q9H3S7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC37.79■■■■□ 3.64
PTPN23Q9H3S7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC37.79■■■■□ 3.64
PTPN23Q9H3S7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
PTPN23Q9H3S7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC37.78■■■■□ 3.64
PTPN23Q9H3S7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC37.78■■■■□ 3.64
PTPN23Q9H3S7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
PTPN23Q9H3S7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC37.78■■■■□ 3.64
PTPN23Q9H3S7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC37.78■■■■□ 3.64
PTPN23Q9H3S7 AL359504.2-201ENST00000605506 1601 ntBASIC37.77■■■■□ 3.64
PTPN23Q9H3S7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC37.76■■■■□ 3.64
PTPN23Q9H3S7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC37.76■■■■□ 3.64
PTPN23Q9H3S7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC37.76■■■■□ 3.63
PTPN23Q9H3S7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC37.76■■■■□ 3.63
PTPN23Q9H3S7 MIR3960-201ENST00000583311 91 ntBASIC37.75■■■■□ 3.63
PTPN23Q9H3S7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC37.74■■■■□ 3.63
PTPN23Q9H3S7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC37.74■■■■□ 3.63
PTPN23Q9H3S7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC37.74■■■■□ 3.63
PTPN23Q9H3S7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC37.74■■■■□ 3.63
PTPN23Q9H3S7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC37.73■■■■□ 3.63
PTPN23Q9H3S7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC37.73■■■■□ 3.63
PTPN23Q9H3S7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC37.73■■■■□ 3.63
PTPN23Q9H3S7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC37.73■■■■□ 3.63
PTPN23Q9H3S7 SPCS2P3-201ENST00000500401 656 ntBASIC37.72■■■■□ 3.63
PTPN23Q9H3S7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC37.72■■■■□ 3.63
PTPN23Q9H3S7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC37.72■■■■□ 3.63
PTPN23Q9H3S7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC37.72■■■■□ 3.63
PTPN23Q9H3S7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
PTPN23Q9H3S7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC37.71■■■■□ 3.63
PTPN23Q9H3S7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
PTPN23Q9H3S7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC37.71■■■■□ 3.63
PTPN23Q9H3S7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC37.7■■■■□ 3.63
PTPN23Q9H3S7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC37.7■■■■□ 3.63
PTPN23Q9H3S7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC37.7■■■■□ 3.63
PTPN23Q9H3S7 DUX4L9-201ENST00000449051 1259 ntBASIC37.7■■■■□ 3.63
PTPN23Q9H3S7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC37.7■■■■□ 3.63
PTPN23Q9H3S7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC37.7■■■■□ 3.63
PTPN23Q9H3S7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC37.69■■■■□ 3.62
PTPN23Q9H3S7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC37.69■■■■□ 3.62
PTPN23Q9H3S7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC37.69■■■■□ 3.62
PTPN23Q9H3S7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC37.69■■■■□ 3.62
PTPN23Q9H3S7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC37.69■■■■□ 3.62
PTPN23Q9H3S7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC37.68■■■■□ 3.62
PTPN23Q9H3S7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC37.68■■■■□ 3.62
PTPN23Q9H3S7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
PTPN23Q9H3S7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC37.67■■■■□ 3.62
PTPN23Q9H3S7 LINC01003-201ENST00000564834 1764 ntBASIC37.67■■■■□ 3.62
PTPN23Q9H3S7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC37.67■■■■□ 3.62
PTPN23Q9H3S7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
PTPN23Q9H3S7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
PTPN23Q9H3S7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
PTPN23Q9H3S7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC37.66■■■■□ 3.62
PTPN23Q9H3S7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC37.66■■■■□ 3.62
PTPN23Q9H3S7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC37.65■■■■□ 3.62
PTPN23Q9H3S7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC37.64■■■■□ 3.62
PTPN23Q9H3S7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC37.64■■■■□ 3.62
PTPN23Q9H3S7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC37.64■■■■□ 3.62
PTPN23Q9H3S7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC37.63■■■■□ 3.62
PTPN23Q9H3S7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.61
PTPN23Q9H3S7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.61
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms