Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.49■■□□□ 1.83
SNX25Q9H3E2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNX25Q9H3E2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNX25Q9H3E2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNX25Q9H3E2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.48■■□□□ 1.83
SNX25Q9H3E2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SNX25Q9H3E2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
SNX25Q9H3E2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.46■■□□□ 1.83
SNX25Q9H3E2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.83
SNX25Q9H3E2 ECEL1P2-201ENST00000461596 1295 ntBASIC26.45■■□□□ 1.82
SNX25Q9H3E2 AL157400.5-201ENST00000507624 621 ntBASIC26.45■■□□□ 1.82
SNX25Q9H3E2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
SNX25Q9H3E2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
SNX25Q9H3E2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
SNX25Q9H3E2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SNX25Q9H3E2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.44■■□□□ 1.82
SNX25Q9H3E2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
SNX25Q9H3E2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
SNX25Q9H3E2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.43■■□□□ 1.82
SNX25Q9H3E2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.42■■□□□ 1.82
SNX25Q9H3E2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNX25Q9H3E2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNX25Q9H3E2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SNX25Q9H3E2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SNX25Q9H3E2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SNX25Q9H3E2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.41■■□□□ 1.82
SNX25Q9H3E2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
SNX25Q9H3E2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.41■■□□□ 1.82
SNX25Q9H3E2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SNX25Q9H3E2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.39■■□□□ 1.82
SNX25Q9H3E2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SNX25Q9H3E2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SNX25Q9H3E2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNX25Q9H3E2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.38■■□□□ 1.81
SNX25Q9H3E2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNX25Q9H3E2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.38■■□□□ 1.81
SNX25Q9H3E2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.38■■□□□ 1.81
SNX25Q9H3E2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.37■■□□□ 1.81
SNX25Q9H3E2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.37■■□□□ 1.81
SNX25Q9H3E2 AL449106.1-201ENST00000608517 1980 ntBASIC26.37■■□□□ 1.81
SNX25Q9H3E2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.37■■□□□ 1.81
SNX25Q9H3E2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SNX25Q9H3E2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SNX25Q9H3E2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
SNX25Q9H3E2 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.36■■□□□ 1.81
SNX25Q9H3E2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
SNX25Q9H3E2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SNX25Q9H3E2 SMPD5-203ENST00000639008 1464 ntBASIC26.35■■□□□ 1.81
SNX25Q9H3E2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SNX25Q9H3E2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.34■■□□□ 1.81
SNX25Q9H3E2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SNX25Q9H3E2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
SNX25Q9H3E2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
SNX25Q9H3E2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.34■■□□□ 1.81
SNX25Q9H3E2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SNX25Q9H3E2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SNX25Q9H3E2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SNX25Q9H3E2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
SNX25Q9H3E2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
SNX25Q9H3E2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.32■■□□□ 1.8
SNX25Q9H3E2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNX25Q9H3E2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNX25Q9H3E2 AL359504.2-201ENST00000605506 1601 ntBASIC26.32■■□□□ 1.8
SNX25Q9H3E2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNX25Q9H3E2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.31■■□□□ 1.8
SNX25Q9H3E2 ABHD17AP5-201ENST00000580133 923 ntBASIC26.31■■□□□ 1.8
SNX25Q9H3E2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.31■■□□□ 1.8
SNX25Q9H3E2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
SNX25Q9H3E2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SNX25Q9H3E2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SNX25Q9H3E2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SNX25Q9H3E2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SNX25Q9H3E2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SNX25Q9H3E2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SNX25Q9H3E2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SNX25Q9H3E2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
SNX25Q9H3E2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
SNX25Q9H3E2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SNX25Q9H3E2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.29■■□□□ 1.8
SNX25Q9H3E2 AC025884.2-201ENST00000553429 711 ntBASIC26.29■■□□□ 1.8
SNX25Q9H3E2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.29■■□□□ 1.8
SNX25Q9H3E2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SNX25Q9H3E2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.28■■□□□ 1.8
SNX25Q9H3E2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SNX25Q9H3E2 AC007029.1-201ENST00000604183 313 ntBASIC26.27■■□□□ 1.8
SNX25Q9H3E2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SNX25Q9H3E2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.27■■□□□ 1.8
SNX25Q9H3E2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SNX25Q9H3E2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.25■■□□□ 1.79
SNX25Q9H3E2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
SNX25Q9H3E2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.25■■□□□ 1.79
SNX25Q9H3E2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SNX25Q9H3E2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNX25Q9H3E2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.24■■□□□ 1.79
SNX25Q9H3E2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SNX25Q9H3E2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SNX25Q9H3E2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNX25Q9H3E2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
SNX25Q9H3E2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.23■■□□□ 1.79
SNX25Q9H3E2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 158.2 ms