Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
NUCKS1Q9H1E3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.72■■□□□ 1.87
NUCKS1Q9H1E3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
NUCKS1Q9H1E3 AC092803.2-201ENST00000564287 1899 ntBASIC26.71■■□□□ 1.87
NUCKS1Q9H1E3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
NUCKS1Q9H1E3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
NUCKS1Q9H1E3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
NUCKS1Q9H1E3 DUSP8P4-201ENST00000399538 1761 ntBASIC26.71■■□□□ 1.87
NUCKS1Q9H1E3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
NUCKS1Q9H1E3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.7■■□□□ 1.86
NUCKS1Q9H1E3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
NUCKS1Q9H1E3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.7■■□□□ 1.86
NUCKS1Q9H1E3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
NUCKS1Q9H1E3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
NUCKS1Q9H1E3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
NUCKS1Q9H1E3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.69■■□□□ 1.86
NUCKS1Q9H1E3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.69■■□□□ 1.86
NUCKS1Q9H1E3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
NUCKS1Q9H1E3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.68■■□□□ 1.86
NUCKS1Q9H1E3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
NUCKS1Q9H1E3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.67■■□□□ 1.86
NUCKS1Q9H1E3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
NUCKS1Q9H1E3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
NUCKS1Q9H1E3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
NUCKS1Q9H1E3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.66■■□□□ 1.86
NUCKS1Q9H1E3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.66■■□□□ 1.86
NUCKS1Q9H1E3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NUCKS1Q9H1E3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.65■■□□□ 1.86
NUCKS1Q9H1E3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.65■■□□□ 1.86
NUCKS1Q9H1E3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
NUCKS1Q9H1E3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.64■■□□□ 1.86
NUCKS1Q9H1E3 CR559946.2-201ENST00000623684 991 ntBASIC26.64■■□□□ 1.86
NUCKS1Q9H1E3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.64■■□□□ 1.85
NUCKS1Q9H1E3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
NUCKS1Q9H1E3 MIR3648-2-201ENST00000581792 180 ntBASIC26.63■■□□□ 1.85
NUCKS1Q9H1E3 MIR3648-1-201ENST00000615959 180 ntBASIC26.63■■□□□ 1.85
NUCKS1Q9H1E3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
NUCKS1Q9H1E3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.63■■□□□ 1.85
NUCKS1Q9H1E3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
NUCKS1Q9H1E3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
NUCKS1Q9H1E3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
NUCKS1Q9H1E3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
NUCKS1Q9H1E3 DUX4L13-201ENST00000554103 1267 ntBASIC26.62■■□□□ 1.85
NUCKS1Q9H1E3 DUX4L15-201ENST00000611059 1267 ntBASIC26.62■■□□□ 1.85
NUCKS1Q9H1E3 DUX4L23-201ENST00000615195 1269 ntBASIC26.62■■□□□ 1.85
NUCKS1Q9H1E3 DUX4L24-201ENST00000617576 1269 ntBASIC26.62■■□□□ 1.85
NUCKS1Q9H1E3 DUX4L22-201ENST00000618238 1269 ntBASIC26.62■■□□□ 1.85
NUCKS1Q9H1E3 DUX4L20-201ENST00000619712 1269 ntBASIC26.62■■□□□ 1.85
NUCKS1Q9H1E3 DUX4L21-201ENST00000622058 1269 ntBASIC26.62■■□□□ 1.85
NUCKS1Q9H1E3 DUX4L10-201ENST00000622460 1267 ntBASIC26.62■■□□□ 1.85
NUCKS1Q9H1E3 DUX4L25-201ENST00000624915 1269 ntBASIC26.62■■□□□ 1.85
NUCKS1Q9H1E3 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.62■■□□□ 1.85
NUCKS1Q9H1E3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
NUCKS1Q9H1E3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.61■■□□□ 1.85
NUCKS1Q9H1E3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
NUCKS1Q9H1E3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.61■■□□□ 1.85
NUCKS1Q9H1E3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.61■■□□□ 1.85
NUCKS1Q9H1E3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NUCKS1Q9H1E3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NUCKS1Q9H1E3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NUCKS1Q9H1E3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.6■■□□□ 1.85
NUCKS1Q9H1E3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NUCKS1Q9H1E3 HLA-V-202ENST00000446817 847 ntBASIC26.6■■□□□ 1.85
NUCKS1Q9H1E3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.6■■□□□ 1.85
NUCKS1Q9H1E3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.6■■□□□ 1.85
NUCKS1Q9H1E3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
NUCKS1Q9H1E3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NUCKS1Q9H1E3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
NUCKS1Q9H1E3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
NUCKS1Q9H1E3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NUCKS1Q9H1E3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NUCKS1Q9H1E3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NUCKS1Q9H1E3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.59■■□□□ 1.85
NUCKS1Q9H1E3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.59■■□□□ 1.85
NUCKS1Q9H1E3 AC016575.1-201ENST00000607026 382 ntBASIC26.59■■□□□ 1.85
NUCKS1Q9H1E3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
NUCKS1Q9H1E3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NUCKS1Q9H1E3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.58■■□□□ 1.85
NUCKS1Q9H1E3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NUCKS1Q9H1E3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
NUCKS1Q9H1E3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
NUCKS1Q9H1E3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.57■■□□□ 1.84
NUCKS1Q9H1E3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NUCKS1Q9H1E3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
NUCKS1Q9H1E3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
NUCKS1Q9H1E3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NUCKS1Q9H1E3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
NUCKS1Q9H1E3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.57■■□□□ 1.84
NUCKS1Q9H1E3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
NUCKS1Q9H1E3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
NUCKS1Q9H1E3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
NUCKS1Q9H1E3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
NUCKS1Q9H1E3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NUCKS1Q9H1E3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NUCKS1Q9H1E3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
NUCKS1Q9H1E3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NUCKS1Q9H1E3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.55■■□□□ 1.84
NUCKS1Q9H1E3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NUCKS1Q9H1E3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
NUCKS1Q9H1E3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms