Protein–RNA interactions for Protein: Q9ER99

Rsc1a1, Regulatory solute carrier protein family 1 member 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsc1a1Q9ER99 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.26■■□□□ 1.15
Rsc1a1Q9ER99 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.26■■□□□ 1.15
Rsc1a1Q9ER99 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rsc1a1Q9ER99 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rsc1a1Q9ER99 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rsc1a1Q9ER99 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.25■■□□□ 1.15
Rsc1a1Q9ER99 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rsc1a1Q9ER99 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rsc1a1Q9ER99 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Rsc1a1Q9ER99 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.24■■□□□ 1.15
Rsc1a1Q9ER99 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rsc1a1Q9ER99 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rsc1a1Q9ER99 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rsc1a1Q9ER99 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rsc1a1Q9ER99 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rsc1a1Q9ER99 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.23■■□□□ 1.15
Rsc1a1Q9ER99 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rsc1a1Q9ER99 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rsc1a1Q9ER99 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rsc1a1Q9ER99 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rsc1a1Q9ER99 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rsc1a1Q9ER99 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rsc1a1Q9ER99 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rsc1a1Q9ER99 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.21■■□□□ 1.15
Rsc1a1Q9ER99 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Rsc1a1Q9ER99 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rsc1a1Q9ER99 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.2■■□□□ 1.14
Rsc1a1Q9ER99 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rsc1a1Q9ER99 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rsc1a1Q9ER99 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Rsc1a1Q9ER99 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rsc1a1Q9ER99 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rsc1a1Q9ER99 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rsc1a1Q9ER99 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Rsc1a1Q9ER99 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.18■■□□□ 1.14
Rsc1a1Q9ER99 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rsc1a1Q9ER99 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rsc1a1Q9ER99 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rsc1a1Q9ER99 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rsc1a1Q9ER99 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
Rsc1a1Q9ER99 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rsc1a1Q9ER99 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rsc1a1Q9ER99 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Rsc1a1Q9ER99 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rsc1a1Q9ER99 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Rsc1a1Q9ER99 Gm45855-201ENSMUST00000212546 880 ntBASIC22.15■■□□□ 1.14
Rsc1a1Q9ER99 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rsc1a1Q9ER99 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.15■■□□□ 1.14
Rsc1a1Q9ER99 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rsc1a1Q9ER99 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.14■■□□□ 1.14
Rsc1a1Q9ER99 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rsc1a1Q9ER99 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Rsc1a1Q9ER99 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rsc1a1Q9ER99 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rsc1a1Q9ER99 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rsc1a1Q9ER99 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Rsc1a1Q9ER99 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rsc1a1Q9ER99 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Rsc1a1Q9ER99 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rsc1a1Q9ER99 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rsc1a1Q9ER99 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rsc1a1Q9ER99 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Rsc1a1Q9ER99 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rsc1a1Q9ER99 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Rsc1a1Q9ER99 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Rsc1a1Q9ER99 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rsc1a1Q9ER99 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rsc1a1Q9ER99 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Rsc1a1Q9ER99 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Rsc1a1Q9ER99 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.09■■□□□ 1.13
Rsc1a1Q9ER99 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rsc1a1Q9ER99 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Rsc1a1Q9ER99 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rsc1a1Q9ER99 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rsc1a1Q9ER99 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rsc1a1Q9ER99 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Rsc1a1Q9ER99 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rsc1a1Q9ER99 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
Rsc1a1Q9ER99 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Rsc1a1Q9ER99 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rsc1a1Q9ER99 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rsc1a1Q9ER99 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rsc1a1Q9ER99 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rsc1a1Q9ER99 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rsc1a1Q9ER99 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rsc1a1Q9ER99 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rsc1a1Q9ER99 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rsc1a1Q9ER99 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.05■■□□□ 1.12
Rsc1a1Q9ER99 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rsc1a1Q9ER99 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rsc1a1Q9ER99 Gm32051-202ENSMUST00000197905 2385 ntBASIC22.04■■□□□ 1.12
Rsc1a1Q9ER99 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rsc1a1Q9ER99 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rsc1a1Q9ER99 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rsc1a1Q9ER99 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Rsc1a1Q9ER99 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Rsc1a1Q9ER99 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rsc1a1Q9ER99 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rsc1a1Q9ER99 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.02■■□□□ 1.12
Rsc1a1Q9ER99 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms