Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lime1Q9EQR5 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lime1Q9EQR5 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Lime1Q9EQR5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lime1Q9EQR5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lime1Q9EQR5 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lime1Q9EQR5 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lime1Q9EQR5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lime1Q9EQR5 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Lime1Q9EQR5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Lime1Q9EQR5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lime1Q9EQR5 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lime1Q9EQR5 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Lime1Q9EQR5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Lime1Q9EQR5 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lime1Q9EQR5 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lime1Q9EQR5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lime1Q9EQR5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Lime1Q9EQR5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lime1Q9EQR5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.69■□□□□ 0.74
Lime1Q9EQR5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lime1Q9EQR5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lime1Q9EQR5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Lime1Q9EQR5 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lime1Q9EQR5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lime1Q9EQR5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lime1Q9EQR5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lime1Q9EQR5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lime1Q9EQR5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.67■□□□□ 0.74
Lime1Q9EQR5 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lime1Q9EQR5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lime1Q9EQR5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lime1Q9EQR5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lime1Q9EQR5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lime1Q9EQR5 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.66■□□□□ 0.74
Lime1Q9EQR5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lime1Q9EQR5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Lime1Q9EQR5 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lime1Q9EQR5 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.66■□□□□ 0.74
Lime1Q9EQR5 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lime1Q9EQR5 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lime1Q9EQR5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lime1Q9EQR5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lime1Q9EQR5 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Lime1Q9EQR5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lime1Q9EQR5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.64■□□□□ 0.73
Lime1Q9EQR5 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lime1Q9EQR5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lime1Q9EQR5 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.64■□□□□ 0.73
Lime1Q9EQR5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.64■□□□□ 0.73
Lime1Q9EQR5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lime1Q9EQR5 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lime1Q9EQR5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lime1Q9EQR5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lime1Q9EQR5 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lime1Q9EQR5 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lime1Q9EQR5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.62■□□□□ 0.73
Lime1Q9EQR5 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.62■□□□□ 0.73
Lime1Q9EQR5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lime1Q9EQR5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.62■□□□□ 0.73
Lime1Q9EQR5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lime1Q9EQR5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lime1Q9EQR5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lime1Q9EQR5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lime1Q9EQR5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lime1Q9EQR5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lime1Q9EQR5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.6■□□□□ 0.73
Lime1Q9EQR5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Lime1Q9EQR5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lime1Q9EQR5 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lime1Q9EQR5 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lime1Q9EQR5 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lime1Q9EQR5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lime1Q9EQR5 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Lime1Q9EQR5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lime1Q9EQR5 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.57■□□□□ 0.72
Lime1Q9EQR5 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lime1Q9EQR5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.57■□□□□ 0.72
Lime1Q9EQR5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lime1Q9EQR5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lime1Q9EQR5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Lime1Q9EQR5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Lime1Q9EQR5 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lime1Q9EQR5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lime1Q9EQR5 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lime1Q9EQR5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lime1Q9EQR5 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lime1Q9EQR5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Lime1Q9EQR5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lime1Q9EQR5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.56■□□□□ 0.72
Lime1Q9EQR5 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.56■□□□□ 0.72
Lime1Q9EQR5 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lime1Q9EQR5 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lime1Q9EQR5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lime1Q9EQR5 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lime1Q9EQR5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lime1Q9EQR5 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lime1Q9EQR5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Lime1Q9EQR5 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lime1Q9EQR5 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms