Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mbd3l1Q9D9H3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mbd3l1Q9D9H3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mbd3l1Q9D9H3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mbd3l1Q9D9H3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Mbd3l1Q9D9H3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mbd3l1Q9D9H3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Mbd3l1Q9D9H3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mbd3l1Q9D9H3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Mbd3l1Q9D9H3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mbd3l1Q9D9H3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mbd3l1Q9D9H3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.59■□□□□ 0.73
Mbd3l1Q9D9H3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mbd3l1Q9D9H3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Mbd3l1Q9D9H3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
Mbd3l1Q9D9H3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mbd3l1Q9D9H3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.58■□□□□ 0.73
Mbd3l1Q9D9H3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Mbd3l1Q9D9H3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Mbd3l1Q9D9H3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Mbd3l1Q9D9H3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Mbd3l1Q9D9H3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Mbd3l1Q9D9H3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Mbd3l1Q9D9H3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Mbd3l1Q9D9H3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Mbd3l1Q9D9H3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Mbd3l1Q9D9H3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Mbd3l1Q9D9H3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mbd3l1Q9D9H3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mbd3l1Q9D9H3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mbd3l1Q9D9H3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Mbd3l1Q9D9H3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mbd3l1Q9D9H3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Mbd3l1Q9D9H3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mbd3l1Q9D9H3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mbd3l1Q9D9H3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mbd3l1Q9D9H3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Mbd3l1Q9D9H3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mbd3l1Q9D9H3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mbd3l1Q9D9H3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Mbd3l1Q9D9H3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mbd3l1Q9D9H3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Mbd3l1Q9D9H3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mbd3l1Q9D9H3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mbd3l1Q9D9H3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mbd3l1Q9D9H3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Mbd3l1Q9D9H3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Mbd3l1Q9D9H3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mbd3l1Q9D9H3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mbd3l1Q9D9H3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Mbd3l1Q9D9H3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mbd3l1Q9D9H3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Mbd3l1Q9D9H3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mbd3l1Q9D9H3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mbd3l1Q9D9H3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Mbd3l1Q9D9H3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mbd3l1Q9D9H3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mbd3l1Q9D9H3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mbd3l1Q9D9H3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mbd3l1Q9D9H3 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.52■□□□□ 0.72
Mbd3l1Q9D9H3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mbd3l1Q9D9H3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.52■□□□□ 0.72
Mbd3l1Q9D9H3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mbd3l1Q9D9H3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Mbd3l1Q9D9H3 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.52■□□□□ 0.72
Mbd3l1Q9D9H3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.52■□□□□ 0.72
Mbd3l1Q9D9H3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Mbd3l1Q9D9H3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Mbd3l1Q9D9H3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mbd3l1Q9D9H3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mbd3l1Q9D9H3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mbd3l1Q9D9H3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mbd3l1Q9D9H3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mbd3l1Q9D9H3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mbd3l1Q9D9H3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Mbd3l1Q9D9H3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mbd3l1Q9D9H3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mbd3l1Q9D9H3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Mbd3l1Q9D9H3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mbd3l1Q9D9H3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Mbd3l1Q9D9H3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mbd3l1Q9D9H3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mbd3l1Q9D9H3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mbd3l1Q9D9H3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mbd3l1Q9D9H3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mbd3l1Q9D9H3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mbd3l1Q9D9H3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Mbd3l1Q9D9H3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Mbd3l1Q9D9H3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Mbd3l1Q9D9H3 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.48■□□□□ 0.71
Mbd3l1Q9D9H3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mbd3l1Q9D9H3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mbd3l1Q9D9H3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Mbd3l1Q9D9H3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Mbd3l1Q9D9H3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mbd3l1Q9D9H3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mbd3l1Q9D9H3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mbd3l1Q9D9H3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Mbd3l1Q9D9H3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mbd3l1Q9D9H3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms