Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Q9CR55 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.7■□□□□ 0.9
Q9CR55 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q9CR55 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q9CR55 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Q9CR55 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q9CR55 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Q9CR55 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q9CR55 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.69■□□□□ 0.9
Q9CR55 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q9CR55 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.69■□□□□ 0.9
Q9CR55 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CR55 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CR55 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CR55 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CR55 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CR55 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9CR55 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CR55 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CR55 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Q9CR55 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CR55 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Q9CR55 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9CR55 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Q9CR55 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Q9CR55 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Q9CR55 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Q9CR55 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Q9CR55 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Q9CR55 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Q9CR55 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q9CR55 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.65■□□□□ 0.9
Q9CR55 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Q9CR55 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.64■□□□□ 0.9
Q9CR55 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Q9CR55 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.64■□□□□ 0.89
Q9CR55 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Q9CR55 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q9CR55 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Q9CR55 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q9CR55 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Q9CR55 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Q9CR55 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q9CR55 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q9CR55 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q9CR55 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Q9CR55 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.62■□□□□ 0.89
Q9CR55 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Q9CR55 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Q9CR55 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q9CR55 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q9CR55 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
Q9CR55 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.61■□□□□ 0.89
Q9CR55 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Q9CR55 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q9CR55 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q9CR55 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q9CR55 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Q9CR55 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Q9CR55 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.6■□□□□ 0.89
Q9CR55 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Q9CR55 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Q9CR55 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Q9CR55 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Q9CR55 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Q9CR55 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.58■□□□□ 0.89
Q9CR55 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Q9CR55 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Q9CR55 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Q9CR55 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Q9CR55 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Q9CR55 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Q9CR55 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Q9CR55 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Q9CR55 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Q9CR55 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Q9CR55 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Q9CR55 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Q9CR55 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Q9CR55 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Q9CR55 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Q9CR55 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.55■□□□□ 0.88
Q9CR55 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Q9CR55 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.55■□□□□ 0.88
Q9CR55 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Q9CR55 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q9CR55 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Q9CR55 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q9CR55 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q9CR55 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q9CR55 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Q9CR55 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.53■□□□□ 0.88
Q9CR55 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Q9CR55 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.53■□□□□ 0.88
Q9CR55 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Q9CR55 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q9CR55 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q9CR55 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Q9CR55 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.52■□□□□ 0.88
Q9CR55 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms