Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP4-3Q9BYR4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP4-3Q9BYR4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP4-3Q9BYR4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP4-3Q9BYR4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP4-3Q9BYR4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP4-3Q9BYR4 AC004987.1-201ENST00000428627 508 ntBASIC8.47□□□□□ -1.05
KRTAP4-3Q9BYR4 ECEL1P2-201ENST00000461596 1295 ntBASIC8.47□□□□□ -1.05
KRTAP4-3Q9BYR4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC8.47□□□□□ -1.05
KRTAP4-3Q9BYR4 AC012354.3-201ENST00000623734 483 ntBASIC8.47□□□□□ -1.05
KRTAP4-3Q9BYR4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP4-3Q9BYR4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC8.47□□□□□ -1.05
KRTAP4-3Q9BYR4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP4-3Q9BYR4 AC009831.1-201ENST00000580420 1582 ntBASIC8.47□□□□□ -1.05
KRTAP4-3Q9BYR4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP4-3Q9BYR4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP4-3Q9BYR4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
KRTAP4-3Q9BYR4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
KRTAP4-3Q9BYR4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
KRTAP4-3Q9BYR4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
KRTAP4-3Q9BYR4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC8.46□□□□□ -1.05
KRTAP4-3Q9BYR4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
KRTAP4-3Q9BYR4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
KRTAP4-3Q9BYR4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
KRTAP4-3Q9BYR4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
KRTAP4-3Q9BYR4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
KRTAP4-3Q9BYR4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
KRTAP4-3Q9BYR4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC8.46□□□□□ -1.06
KRTAP4-3Q9BYR4 AL592293.1-201ENST00000502889 1188 ntBASIC8.46□□□□□ -1.06
KRTAP4-3Q9BYR4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
KRTAP4-3Q9BYR4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
KRTAP4-3Q9BYR4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
KRTAP4-3Q9BYR4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
KRTAP4-3Q9BYR4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
KRTAP4-3Q9BYR4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
KRTAP4-3Q9BYR4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
KRTAP4-3Q9BYR4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC8.45□□□□□ -1.06
KRTAP4-3Q9BYR4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
KRTAP4-3Q9BYR4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
KRTAP4-3Q9BYR4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
KRTAP4-3Q9BYR4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
KRTAP4-3Q9BYR4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC8.45□□□□□ -1.06
KRTAP4-3Q9BYR4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
KRTAP4-3Q9BYR4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
KRTAP4-3Q9BYR4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
KRTAP4-3Q9BYR4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
KRTAP4-3Q9BYR4 SMPD5-203ENST00000639008 1464 ntBASIC8.45□□□□□ -1.06
KRTAP4-3Q9BYR4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
KRTAP4-3Q9BYR4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
KRTAP4-3Q9BYR4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
KRTAP4-3Q9BYR4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
KRTAP4-3Q9BYR4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
KRTAP4-3Q9BYR4 ATP5G2P3-201ENST00000429083 425 ntBASIC8.44□□□□□ -1.06
KRTAP4-3Q9BYR4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC8.44□□□□□ -1.06
KRTAP4-3Q9BYR4 SPCS2P3-201ENST00000500401 656 ntBASIC8.44□□□□□ -1.06
KRTAP4-3Q9BYR4 AC007029.1-201ENST00000604183 313 ntBASIC8.44□□□□□ -1.06
KRTAP4-3Q9BYR4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
KRTAP4-3Q9BYR4 AC133552.2-201ENST00000619106 1032 ntBASIC8.44□□□□□ -1.06
KRTAP4-3Q9BYR4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
KRTAP4-3Q9BYR4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC8.44□□□□□ -1.06
KRTAP4-3Q9BYR4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
KRTAP4-3Q9BYR4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
KRTAP4-3Q9BYR4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
KRTAP4-3Q9BYR4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC8.43□□□□□ -1.06
KRTAP4-3Q9BYR4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
KRTAP4-3Q9BYR4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
KRTAP4-3Q9BYR4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
KRTAP4-3Q9BYR4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
KRTAP4-3Q9BYR4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC8.43□□□□□ -1.06
KRTAP4-3Q9BYR4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC8.43□□□□□ -1.06
KRTAP4-3Q9BYR4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC8.43□□□□□ -1.06
KRTAP4-3Q9BYR4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC8.43□□□□□ -1.06
KRTAP4-3Q9BYR4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
KRTAP4-3Q9BYR4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
KRTAP4-3Q9BYR4 AL359504.2-201ENST00000605506 1601 ntBASIC8.43□□□□□ -1.06
KRTAP4-3Q9BYR4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
KRTAP4-3Q9BYR4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
KRTAP4-3Q9BYR4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
KRTAP4-3Q9BYR4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
KRTAP4-3Q9BYR4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
KRTAP4-3Q9BYR4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC8.42□□□□□ -1.06
KRTAP4-3Q9BYR4 AC126177.7-201ENST00000547904 679 ntBASIC8.42□□□□□ -1.06
KRTAP4-3Q9BYR4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC8.42□□□□□ -1.06
KRTAP4-3Q9BYR4 AC026202.3-201ENST00000600805 1127 ntBASIC8.42□□□□□ -1.06
KRTAP4-3Q9BYR4 AC129492.7-201ENST00000622992 756 ntBASIC8.42□□□□□ -1.06
KRTAP4-3Q9BYR4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
KRTAP4-3Q9BYR4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
KRTAP4-3Q9BYR4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC8.42□□□□□ -1.06
KRTAP4-3Q9BYR4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC8.42□□□□□ -1.06
KRTAP4-3Q9BYR4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC8.42□□□□□ -1.06
KRTAP4-3Q9BYR4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
KRTAP4-3Q9BYR4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP4-3Q9BYR4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP4-3Q9BYR4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP4-3Q9BYR4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC8.41□□□□□ -1.06
KRTAP4-3Q9BYR4 TSPY13P-201ENST00000338964 914 ntBASIC8.41□□□□□ -1.06
KRTAP4-3Q9BYR4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP4-3Q9BYR4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP4-3Q9BYR4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC8.41□□□□□ -1.06
KRTAP4-3Q9BYR4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms