Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CMSS1Q9BQ75 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CMSS1Q9BQ75 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CMSS1Q9BQ75 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CMSS1Q9BQ75 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CMSS1Q9BQ75 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.9■□□□□ 0.94
CMSS1Q9BQ75 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CMSS1Q9BQ75 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CMSS1Q9BQ75 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CMSS1Q9BQ75 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.9■□□□□ 0.94
CMSS1Q9BQ75 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.94
CMSS1Q9BQ75 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.89■□□□□ 0.94
CMSS1Q9BQ75 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CMSS1Q9BQ75 AP006261.1-201ENST00000584783 668 ntBASIC20.89■□□□□ 0.93
CMSS1Q9BQ75 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.89■□□□□ 0.93
CMSS1Q9BQ75 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CMSS1Q9BQ75 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CMSS1Q9BQ75 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CMSS1Q9BQ75 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CMSS1Q9BQ75 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.88■□□□□ 0.93
CMSS1Q9BQ75 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CMSS1Q9BQ75 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CMSS1Q9BQ75 AC092803.2-201ENST00000564287 1899 ntBASIC20.88■□□□□ 0.93
CMSS1Q9BQ75 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CMSS1Q9BQ75 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.87■□□□□ 0.93
CMSS1Q9BQ75 AC110285.7-201ENST00000624417 1536 ntBASIC20.87■□□□□ 0.93
CMSS1Q9BQ75 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CMSS1Q9BQ75 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CMSS1Q9BQ75 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.86■□□□□ 0.93
CMSS1Q9BQ75 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CMSS1Q9BQ75 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.86■□□□□ 0.93
CMSS1Q9BQ75 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CMSS1Q9BQ75 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.86■□□□□ 0.93
CMSS1Q9BQ75 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CMSS1Q9BQ75 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CMSS1Q9BQ75 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CMSS1Q9BQ75 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CMSS1Q9BQ75 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.85■□□□□ 0.93
CMSS1Q9BQ75 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CMSS1Q9BQ75 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CMSS1Q9BQ75 DUSP8P4-201ENST00000399538 1761 ntBASIC20.85■□□□□ 0.93
CMSS1Q9BQ75 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CMSS1Q9BQ75 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
CMSS1Q9BQ75 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CMSS1Q9BQ75 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CMSS1Q9BQ75 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CMSS1Q9BQ75 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CMSS1Q9BQ75 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.83■□□□□ 0.93
CMSS1Q9BQ75 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CMSS1Q9BQ75 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CMSS1Q9BQ75 AC020928.2-201ENST00000588717 2197 ntBASIC20.83■□□□□ 0.92
CMSS1Q9BQ75 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.83■□□□□ 0.92
CMSS1Q9BQ75 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.82■□□□□ 0.92
CMSS1Q9BQ75 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CMSS1Q9BQ75 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CMSS1Q9BQ75 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CMSS1Q9BQ75 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
CMSS1Q9BQ75 AC087741.3-201ENST00000624270 1347 ntBASIC20.81■□□□□ 0.92
CMSS1Q9BQ75 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CMSS1Q9BQ75 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.81■□□□□ 0.92
CMSS1Q9BQ75 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CMSS1Q9BQ75 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.81■□□□□ 0.92
CMSS1Q9BQ75 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CMSS1Q9BQ75 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CMSS1Q9BQ75 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CMSS1Q9BQ75 AC142472.1-201ENST00000612013 1741 ntBASIC20.81■□□□□ 0.92
CMSS1Q9BQ75 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CMSS1Q9BQ75 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CMSS1Q9BQ75 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.8■□□□□ 0.92
CMSS1Q9BQ75 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CMSS1Q9BQ75 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CMSS1Q9BQ75 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CMSS1Q9BQ75 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.79■□□□□ 0.92
CMSS1Q9BQ75 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CMSS1Q9BQ75 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CMSS1Q9BQ75 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CMSS1Q9BQ75 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CMSS1Q9BQ75 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.79■□□□□ 0.92
CMSS1Q9BQ75 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CMSS1Q9BQ75 WHAMMP3-201ENST00000611636 1609 ntBASIC20.78■□□□□ 0.92
CMSS1Q9BQ75 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CMSS1Q9BQ75 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CMSS1Q9BQ75 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CMSS1Q9BQ75 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CMSS1Q9BQ75 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CMSS1Q9BQ75 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.78■□□□□ 0.92
CMSS1Q9BQ75 AC044849.2-201ENST00000606596 710 ntBASIC20.78■□□□□ 0.92
CMSS1Q9BQ75 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.78■□□□□ 0.92
CMSS1Q9BQ75 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CMSS1Q9BQ75 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CMSS1Q9BQ75 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CMSS1Q9BQ75 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.77■□□□□ 0.92
CMSS1Q9BQ75 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CMSS1Q9BQ75 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.77■□□□□ 0.92
CMSS1Q9BQ75 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.77■□□□□ 0.92
CMSS1Q9BQ75 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CMSS1Q9BQ75 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CMSS1Q9BQ75 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.76■□□□□ 0.91
CMSS1Q9BQ75 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CMSS1Q9BQ75 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms