Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Pcdh15Q99PJ1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Pcdh15Q99PJ1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC26.67■■□□□ 1.86
Pcdh15Q99PJ1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
Pcdh15Q99PJ1 Gm42501-201ENSMUST00000200220 1026 ntBASIC26.67■■□□□ 1.86
Pcdh15Q99PJ1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdh15Q99PJ1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
Pcdh15Q99PJ1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC26.65■■□□□ 1.86
Pcdh15Q99PJ1 Gm18755-201ENSMUST00000218030 1099 ntBASIC26.65■■□□□ 1.86
Pcdh15Q99PJ1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdh15Q99PJ1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC26.64■■□□□ 1.86
Pcdh15Q99PJ1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pcdh15Q99PJ1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pcdh15Q99PJ1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pcdh15Q99PJ1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Pcdh15Q99PJ1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC26.64■■□□□ 1.85
Pcdh15Q99PJ1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.63■■□□□ 1.85
Pcdh15Q99PJ1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdh15Q99PJ1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
Pcdh15Q99PJ1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdh15Q99PJ1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Pcdh15Q99PJ1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
Pcdh15Q99PJ1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Pcdh15Q99PJ1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Pcdh15Q99PJ1 Zxda-201ENSMUST00000117281 2621 ntBASIC26.61■■□□□ 1.85
Pcdh15Q99PJ1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdh15Q99PJ1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdh15Q99PJ1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC26.6■■□□□ 1.85
Pcdh15Q99PJ1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdh15Q99PJ1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Pcdh15Q99PJ1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC26.59■■□□□ 1.85
Pcdh15Q99PJ1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.59■■□□□ 1.85
Pcdh15Q99PJ1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdh15Q99PJ1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdh15Q99PJ1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdh15Q99PJ1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
Pcdh15Q99PJ1 Gm37847-201ENSMUST00000192163 1497 ntBASIC26.57■■□□□ 1.84
Pcdh15Q99PJ1 Gm31748-201ENSMUST00000194938 1497 ntBASIC26.57■■□□□ 1.84
Pcdh15Q99PJ1 Gm4419-202ENSMUST00000226239 1431 ntBASIC26.57■■□□□ 1.84
Pcdh15Q99PJ1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdh15Q99PJ1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdh15Q99PJ1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdh15Q99PJ1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdh15Q99PJ1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC26.55■■□□□ 1.84
Pcdh15Q99PJ1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC26.55■■□□□ 1.84
Pcdh15Q99PJ1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdh15Q99PJ1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC26.55■■□□□ 1.84
Pcdh15Q99PJ1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdh15Q99PJ1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdh15Q99PJ1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdh15Q99PJ1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdh15Q99PJ1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdh15Q99PJ1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdh15Q99PJ1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdh15Q99PJ1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
Pcdh15Q99PJ1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Pcdh15Q99PJ1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Pcdh15Q99PJ1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Pcdh15Q99PJ1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Pcdh15Q99PJ1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
Pcdh15Q99PJ1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Pcdh15Q99PJ1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Pcdh15Q99PJ1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdh15Q99PJ1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdh15Q99PJ1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdh15Q99PJ1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdh15Q99PJ1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Pcdh15Q99PJ1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC26.5■■□□□ 1.83
Pcdh15Q99PJ1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Pcdh15Q99PJ1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Pcdh15Q99PJ1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdh15Q99PJ1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Pcdh15Q99PJ1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdh15Q99PJ1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC26.49■■□□□ 1.83
Pcdh15Q99PJ1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdh15Q99PJ1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC26.48■■□□□ 1.83
Pcdh15Q99PJ1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdh15Q99PJ1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdh15Q99PJ1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC26.47■■□□□ 1.83
Pcdh15Q99PJ1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdh15Q99PJ1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdh15Q99PJ1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC26.47■■□□□ 1.83
Pcdh15Q99PJ1 Gm10232-201ENSMUST00000089221 720 ntBASIC26.47■■□□□ 1.83
Pcdh15Q99PJ1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdh15Q99PJ1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC26.46■■□□□ 1.83
Pcdh15Q99PJ1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.46■■□□□ 1.83
Pcdh15Q99PJ1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Pcdh15Q99PJ1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC26.45■■□□□ 1.83
Pcdh15Q99PJ1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC26.45■■□□□ 1.82
Pcdh15Q99PJ1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pcdh15Q99PJ1 AC117769.4-201ENSMUST00000225679 685 ntBASIC26.44■■□□□ 1.82
Pcdh15Q99PJ1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pcdh15Q99PJ1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pcdh15Q99PJ1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdh15Q99PJ1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdh15Q99PJ1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.43■■□□□ 1.82
Pcdh15Q99PJ1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC26.43■■□□□ 1.82
Pcdh15Q99PJ1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC26.43■■□□□ 1.82
Pcdh15Q99PJ1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC26.43■■□□□ 1.82
Pcdh15Q99PJ1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 135.2 ms