Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Cdh23Q99PF4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cdh23Q99PF4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cdh23Q99PF4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Cdh23Q99PF4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cdh23Q99PF4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cdh23Q99PF4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cdh23Q99PF4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cdh23Q99PF4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cdh23Q99PF4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cdh23Q99PF4 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.77■■□□□ 1.4
Cdh23Q99PF4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC23.77■■□□□ 1.4
Cdh23Q99PF4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC23.76■■□□□ 1.39
Cdh23Q99PF4 Gm21956-201ENSMUST00000179946 522 ntBASIC23.76■■□□□ 1.39
Cdh23Q99PF4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.76■■□□□ 1.39
Cdh23Q99PF4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.76■■□□□ 1.39
Cdh23Q99PF4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Cdh23Q99PF4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Cdh23Q99PF4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.75■■□□□ 1.39
Cdh23Q99PF4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.75■■□□□ 1.39
Cdh23Q99PF4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cdh23Q99PF4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cdh23Q99PF4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC23.74■■□□□ 1.39
Cdh23Q99PF4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cdh23Q99PF4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.74■■□□□ 1.39
Cdh23Q99PF4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Cdh23Q99PF4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cdh23Q99PF4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cdh23Q99PF4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Cdh23Q99PF4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cdh23Q99PF4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Cdh23Q99PF4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Cdh23Q99PF4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cdh23Q99PF4 Gm18755-201ENSMUST00000218030 1099 ntBASIC23.72■■□□□ 1.39
Cdh23Q99PF4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Cdh23Q99PF4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cdh23Q99PF4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
Cdh23Q99PF4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Cdh23Q99PF4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Cdh23Q99PF4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cdh23Q99PF4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cdh23Q99PF4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC23.7■■□□□ 1.38
Cdh23Q99PF4 Terc-201ENSMUST00000082862 423 ntBASIC23.7■■□□□ 1.38
Cdh23Q99PF4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.69■■□□□ 1.38
Cdh23Q99PF4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.69■■□□□ 1.38
Cdh23Q99PF4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.69■■□□□ 1.38
Cdh23Q99PF4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cdh23Q99PF4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Cdh23Q99PF4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cdh23Q99PF4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Cdh23Q99PF4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
Cdh23Q99PF4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cdh23Q99PF4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cdh23Q99PF4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cdh23Q99PF4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Cdh23Q99PF4 Gm44428-201ENSMUST00000204474 874 ntBASIC23.66■■□□□ 1.38
Cdh23Q99PF4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.65■■□□□ 1.38
Cdh23Q99PF4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.65■■□□□ 1.38
Cdh23Q99PF4 Slc35b2-207ENSMUST00000226086 850 ntBASIC23.65■■□□□ 1.38
Cdh23Q99PF4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Cdh23Q99PF4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cdh23Q99PF4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.64■■□□□ 1.37
Cdh23Q99PF4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.63■■□□□ 1.37
Cdh23Q99PF4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cdh23Q99PF4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC23.63■■□□□ 1.37
Cdh23Q99PF4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cdh23Q99PF4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cdh23Q99PF4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cdh23Q99PF4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Cdh23Q99PF4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cdh23Q99PF4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cdh23Q99PF4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cdh23Q99PF4 Gm10232-201ENSMUST00000089221 720 ntBASIC23.61■■□□□ 1.37
Cdh23Q99PF4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Cdh23Q99PF4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.61■■□□□ 1.37
Cdh23Q99PF4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Cdh23Q99PF4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Cdh23Q99PF4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cdh23Q99PF4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cdh23Q99PF4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cdh23Q99PF4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.6■■□□□ 1.37
Cdh23Q99PF4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Cdh23Q99PF4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Cdh23Q99PF4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cdh23Q99PF4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Cdh23Q99PF4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC23.58■■□□□ 1.37
Cdh23Q99PF4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Cdh23Q99PF4 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.58■■□□□ 1.37
Cdh23Q99PF4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Cdh23Q99PF4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Cdh23Q99PF4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.57■■□□□ 1.36
Cdh23Q99PF4 Gm13241-201ENSMUST00000094493 780 ntBASIC23.57■■□□□ 1.36
Cdh23Q99PF4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Cdh23Q99PF4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Cdh23Q99PF4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cdh23Q99PF4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Cdh23Q99PF4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Cdh23Q99PF4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Cdh23Q99PF4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.55■■□□□ 1.36
Cdh23Q99PF4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms