Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ubqln4Q99NB8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ubqln4Q99NB8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Ubqln4Q99NB8 Gm6311-201ENSMUST00000073790 878 ntBASIC20.39■□□□□ 0.85
Ubqln4Q99NB8 Terc-201ENSMUST00000082862 423 ntBASIC20.39■□□□□ 0.85
Ubqln4Q99NB8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ubqln4Q99NB8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ubqln4Q99NB8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ubqln4Q99NB8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ubqln4Q99NB8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Ubqln4Q99NB8 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.38■□□□□ 0.85
Ubqln4Q99NB8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.38■□□□□ 0.85
Ubqln4Q99NB8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ubqln4Q99NB8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ubqln4Q99NB8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ubqln4Q99NB8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ubqln4Q99NB8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.37■□□□□ 0.85
Ubqln4Q99NB8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ubqln4Q99NB8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ubqln4Q99NB8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ubqln4Q99NB8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubqln4Q99NB8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ubqln4Q99NB8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubqln4Q99NB8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.35■□□□□ 0.85
Ubqln4Q99NB8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.34■□□□□ 0.85
Ubqln4Q99NB8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubqln4Q99NB8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubqln4Q99NB8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ubqln4Q99NB8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubqln4Q99NB8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.34■□□□□ 0.85
Ubqln4Q99NB8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.34■□□□□ 0.85
Ubqln4Q99NB8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
Ubqln4Q99NB8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubqln4Q99NB8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ubqln4Q99NB8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ubqln4Q99NB8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Ubqln4Q99NB8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ubqln4Q99NB8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Ubqln4Q99NB8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ubqln4Q99NB8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ubqln4Q99NB8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ubqln4Q99NB8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ubqln4Q99NB8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ubqln4Q99NB8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ubqln4Q99NB8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ubqln4Q99NB8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Ubqln4Q99NB8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.32■□□□□ 0.84
Ubqln4Q99NB8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ubqln4Q99NB8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ubqln4Q99NB8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ubqln4Q99NB8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ubqln4Q99NB8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubqln4Q99NB8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubqln4Q99NB8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ubqln4Q99NB8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ubqln4Q99NB8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.3■□□□□ 0.84
Ubqln4Q99NB8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubqln4Q99NB8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ubqln4Q99NB8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.29■□□□□ 0.84
Ubqln4Q99NB8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Ubqln4Q99NB8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ubqln4Q99NB8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ubqln4Q99NB8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ubqln4Q99NB8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ubqln4Q99NB8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ubqln4Q99NB8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ubqln4Q99NB8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ubqln4Q99NB8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.27■□□□□ 0.84
Ubqln4Q99NB8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.27■□□□□ 0.84
Ubqln4Q99NB8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.27■□□□□ 0.84
Ubqln4Q99NB8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.27■□□□□ 0.84
Ubqln4Q99NB8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ubqln4Q99NB8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ubqln4Q99NB8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ubqln4Q99NB8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ubqln4Q99NB8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Ubqln4Q99NB8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.27■□□□□ 0.83
Ubqln4Q99NB8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Ubqln4Q99NB8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ubqln4Q99NB8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.26■□□□□ 0.83
Ubqln4Q99NB8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubqln4Q99NB8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubqln4Q99NB8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubqln4Q99NB8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ubqln4Q99NB8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubqln4Q99NB8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubqln4Q99NB8 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.25■□□□□ 0.83
Ubqln4Q99NB8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubqln4Q99NB8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ubqln4Q99NB8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubqln4Q99NB8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.25■□□□□ 0.83
Ubqln4Q99NB8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubqln4Q99NB8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubqln4Q99NB8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubqln4Q99NB8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubqln4Q99NB8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubqln4Q99NB8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubqln4Q99NB8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubqln4Q99NB8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ubqln4Q99NB8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms