Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Thumpd1Q99J36 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Thumpd1Q99J36 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Thumpd1Q99J36 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Thumpd1Q99J36 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Thumpd1Q99J36 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Thumpd1Q99J36 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Thumpd1Q99J36 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.05■□□□□ 0.8
Thumpd1Q99J36 Gm45855-201ENSMUST00000212546 880 ntBASIC20.05■□□□□ 0.8
Thumpd1Q99J36 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Thumpd1Q99J36 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Thumpd1Q99J36 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Thumpd1Q99J36 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Thumpd1Q99J36 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Thumpd1Q99J36 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Thumpd1Q99J36 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.04■□□□□ 0.8
Thumpd1Q99J36 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Thumpd1Q99J36 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Thumpd1Q99J36 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Thumpd1Q99J36 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Thumpd1Q99J36 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Thumpd1Q99J36 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Thumpd1Q99J36 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Thumpd1Q99J36 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Thumpd1Q99J36 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Thumpd1Q99J36 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Thumpd1Q99J36 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Thumpd1Q99J36 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Thumpd1Q99J36 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Thumpd1Q99J36 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Thumpd1Q99J36 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Thumpd1Q99J36 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Thumpd1Q99J36 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20■□□□□ 0.79
Thumpd1Q99J36 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20■□□□□ 0.79
Thumpd1Q99J36 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20■□□□□ 0.79
Thumpd1Q99J36 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Thumpd1Q99J36 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Thumpd1Q99J36 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.99■□□□□ 0.79
Thumpd1Q99J36 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Thumpd1Q99J36 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Thumpd1Q99J36 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Thumpd1Q99J36 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Thumpd1Q99J36 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.99■□□□□ 0.79
Thumpd1Q99J36 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Thumpd1Q99J36 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Thumpd1Q99J36 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Thumpd1Q99J36 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Thumpd1Q99J36 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Thumpd1Q99J36 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Thumpd1Q99J36 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
Thumpd1Q99J36 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Thumpd1Q99J36 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Thumpd1Q99J36 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Thumpd1Q99J36 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Thumpd1Q99J36 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Thumpd1Q99J36 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Thumpd1Q99J36 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Thumpd1Q99J36 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.96■□□□□ 0.79
Thumpd1Q99J36 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Thumpd1Q99J36 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Thumpd1Q99J36 Gm37136-201ENSMUST00000194368 194 ntBASIC19.94■□□□□ 0.78
Thumpd1Q99J36 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.94■□□□□ 0.78
Thumpd1Q99J36 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Thumpd1Q99J36 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Thumpd1Q99J36 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Thumpd1Q99J36 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.93■□□□□ 0.78
Thumpd1Q99J36 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Thumpd1Q99J36 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Thumpd1Q99J36 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Thumpd1Q99J36 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Thumpd1Q99J36 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Thumpd1Q99J36 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Thumpd1Q99J36 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.92■□□□□ 0.78
Thumpd1Q99J36 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Thumpd1Q99J36 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Thumpd1Q99J36 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Thumpd1Q99J36 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Thumpd1Q99J36 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Thumpd1Q99J36 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Thumpd1Q99J36 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Thumpd1Q99J36 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Thumpd1Q99J36 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Thumpd1Q99J36 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Thumpd1Q99J36 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Thumpd1Q99J36 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Thumpd1Q99J36 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.89■□□□□ 0.77
Thumpd1Q99J36 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Thumpd1Q99J36 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Thumpd1Q99J36 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Thumpd1Q99J36 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Thumpd1Q99J36 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Thumpd1Q99J36 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Thumpd1Q99J36 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Thumpd1Q99J36 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Thumpd1Q99J36 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.88■□□□□ 0.77
Thumpd1Q99J36 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Thumpd1Q99J36 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Thumpd1Q99J36 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Thumpd1Q99J36 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.87■□□□□ 0.77
Thumpd1Q99J36 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms