Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF48Q96MX3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF48Q96MX3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ZNF48Q96MX3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ZNF48Q96MX3 AL592293.1-201ENST00000502889 1188 ntBASIC20.15■□□□□ 0.82
ZNF48Q96MX3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.15■□□□□ 0.82
ZNF48Q96MX3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF48Q96MX3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF48Q96MX3 AC009831.1-201ENST00000580420 1582 ntBASIC20.15■□□□□ 0.82
ZNF48Q96MX3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
ZNF48Q96MX3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF48Q96MX3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.15■□□□□ 0.82
ZNF48Q96MX3 DRD5P2-201ENST00000421395 2012 ntBASIC20.15■□□□□ 0.82
ZNF48Q96MX3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
ZNF48Q96MX3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF48Q96MX3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.14■□□□□ 0.81
ZNF48Q96MX3 SMPD5-203ENST00000639008 1464 ntBASIC20.14■□□□□ 0.81
ZNF48Q96MX3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.14■□□□□ 0.81
ZNF48Q96MX3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.14■□□□□ 0.81
ZNF48Q96MX3 AC129492.7-201ENST00000622992 756 ntBASIC20.14■□□□□ 0.81
ZNF48Q96MX3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF48Q96MX3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.13■□□□□ 0.81
ZNF48Q96MX3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF48Q96MX3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF48Q96MX3 AC133552.2-201ENST00000619106 1032 ntBASIC20.13■□□□□ 0.81
ZNF48Q96MX3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
ZNF48Q96MX3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF48Q96MX3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ZNF48Q96MX3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF48Q96MX3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF48Q96MX3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF48Q96MX3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ZNF48Q96MX3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ZNF48Q96MX3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF48Q96MX3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF48Q96MX3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF48Q96MX3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.11■□□□□ 0.81
ZNF48Q96MX3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF48Q96MX3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF48Q96MX3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
ZNF48Q96MX3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF48Q96MX3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.1■□□□□ 0.81
ZNF48Q96MX3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF48Q96MX3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.09■□□□□ 0.81
ZNF48Q96MX3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.09■□□□□ 0.81
ZNF48Q96MX3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF48Q96MX3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF48Q96MX3 DUX4L18-201ENST00000553347 1267 ntBASIC20.09■□□□□ 0.81
ZNF48Q96MX3 AC025884.2-201ENST00000553429 711 ntBASIC20.09■□□□□ 0.81
ZNF48Q96MX3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF48Q96MX3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.09■□□□□ 0.81
ZNF48Q96MX3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.09■□□□□ 0.81
ZNF48Q96MX3 AP002414.2-202ENST00000590929 1450 ntBASIC20.08■□□□□ 0.81
ZNF48Q96MX3 RARRES2P1-201ENST00000474487 481 ntBASIC20.08■□□□□ 0.81
ZNF48Q96MX3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.08■□□□□ 0.81
ZNF48Q96MX3 AC026202.3-201ENST00000600805 1127 ntBASIC20.08■□□□□ 0.81
ZNF48Q96MX3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
ZNF48Q96MX3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZNF48Q96MX3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF48Q96MX3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF48Q96MX3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.07■□□□□ 0.8
ZNF48Q96MX3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF48Q96MX3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.07■□□□□ 0.8
ZNF48Q96MX3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF48Q96MX3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF48Q96MX3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF48Q96MX3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF48Q96MX3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF48Q96MX3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF48Q96MX3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ZNF48Q96MX3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF48Q96MX3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF48Q96MX3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.05■□□□□ 0.8
ZNF48Q96MX3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF48Q96MX3 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF48Q96MX3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.05■□□□□ 0.8
ZNF48Q96MX3 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF48Q96MX3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF48Q96MX3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ZNF48Q96MX3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
ZNF48Q96MX3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF48Q96MX3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF48Q96MX3 RP9P-202ENST00000450133 1212 ntBASIC20.03■□□□□ 0.8
ZNF48Q96MX3 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.03■□□□□ 0.8
ZNF48Q96MX3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.03■□□□□ 0.8
ZNF48Q96MX3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.03■□□□□ 0.8
ZNF48Q96MX3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
ZNF48Q96MX3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
ZNF48Q96MX3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF48Q96MX3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.02■□□□□ 0.8
ZNF48Q96MX3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.02■□□□□ 0.8
ZNF48Q96MX3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ZNF48Q96MX3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ZNF48Q96MX3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ZNF48Q96MX3 AC093536.1-201ENST00000569153 554 ntBASIC20.01■□□□□ 0.79
ZNF48Q96MX3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ZNF48Q96MX3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF48Q96MX3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF48Q96MX3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF48Q96MX3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms