Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
ZNF428Q96B54 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
ZNF428Q96B54 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC32.02■■■□□ 2.72
ZNF428Q96B54 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC32.02■■■□□ 2.72
ZNF428Q96B54 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
ZNF428Q96B54 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC32.01■■■□□ 2.72
ZNF428Q96B54 ABHD17AP5-201ENST00000580133 923 ntBASIC32.01■■■□□ 2.71
ZNF428Q96B54 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC32.01■■■□□ 2.71
ZNF428Q96B54 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC32.01■■■□□ 2.71
ZNF428Q96B54 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
ZNF428Q96B54 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC32■■■□□ 2.71
ZNF428Q96B54 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC32■■■□□ 2.71
ZNF428Q96B54 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
ZNF428Q96B54 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC32■■■□□ 2.71
ZNF428Q96B54 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC32■■■□□ 2.71
ZNF428Q96B54 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC32■■■□□ 2.71
ZNF428Q96B54 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
ZNF428Q96B54 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
ZNF428Q96B54 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC31.98■■■□□ 2.71
ZNF428Q96B54 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
ZNF428Q96B54 AC060814.1-201ENST00000554326 538 ntBASIC31.98■■■□□ 2.71
ZNF428Q96B54 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
ZNF428Q96B54 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.98■■■□□ 2.71
ZNF428Q96B54 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC31.97■■■□□ 2.71
ZNF428Q96B54 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.97■■■□□ 2.71
ZNF428Q96B54 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
ZNF428Q96B54 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.97■■■□□ 2.71
ZNF428Q96B54 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
ZNF428Q96B54 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
ZNF428Q96B54 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
ZNF428Q96B54 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
ZNF428Q96B54 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.96■■■□□ 2.71
ZNF428Q96B54 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
ZNF428Q96B54 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
ZNF428Q96B54 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
ZNF428Q96B54 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
ZNF428Q96B54 AL449106.1-201ENST00000608517 1980 ntBASIC31.95■■■□□ 2.71
ZNF428Q96B54 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
ZNF428Q96B54 AL121749.1-202ENST00000609313 2153 ntBASIC31.95■■■□□ 2.7
ZNF428Q96B54 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.7
ZNF428Q96B54 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
ZNF428Q96B54 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ZNF428Q96B54 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
ZNF428Q96B54 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
ZNF428Q96B54 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ZNF428Q96B54 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
ZNF428Q96B54 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
ZNF428Q96B54 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
ZNF428Q96B54 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
ZNF428Q96B54 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
ZNF428Q96B54 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
ZNF428Q96B54 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.92■■■□□ 2.7
ZNF428Q96B54 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC31.92■■■□□ 2.7
ZNF428Q96B54 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC31.92■■■□□ 2.7
ZNF428Q96B54 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
ZNF428Q96B54 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
ZNF428Q96B54 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.91■■■□□ 2.7
ZNF428Q96B54 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
ZNF428Q96B54 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC31.9■■■□□ 2.7
ZNF428Q96B54 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
ZNF428Q96B54 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
ZNF428Q96B54 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC31.89■■■□□ 2.69
ZNF428Q96B54 AC126177.7-201ENST00000547904 679 ntBASIC31.88■■■□□ 2.69
ZNF428Q96B54 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC31.87■■■□□ 2.69
ZNF428Q96B54 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
ZNF428Q96B54 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC31.87■■■□□ 2.69
ZNF428Q96B54 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
ZNF428Q96B54 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC31.86■■■□□ 2.69
ZNF428Q96B54 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC31.86■■■□□ 2.69
ZNF428Q96B54 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
ZNF428Q96B54 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
ZNF428Q96B54 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
ZNF428Q96B54 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
ZNF428Q96B54 AL359258.2-201ENST00000564063 1566 ntBASIC31.83■■■□□ 2.69
ZNF428Q96B54 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
ZNF428Q96B54 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC31.82■■■□□ 2.68
ZNF428Q96B54 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC31.82■■■□□ 2.68
ZNF428Q96B54 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
ZNF428Q96B54 U85056.1-201ENST00000616429 682 ntBASIC31.82■■■□□ 2.68
ZNF428Q96B54 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
ZNF428Q96B54 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC31.82■■■□□ 2.68
ZNF428Q96B54 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC31.81■■■□□ 2.68
ZNF428Q96B54 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
ZNF428Q96B54 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
ZNF428Q96B54 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
ZNF428Q96B54 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
ZNF428Q96B54 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
ZNF428Q96B54 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
ZNF428Q96B54 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.8■■■□□ 2.68
ZNF428Q96B54 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
ZNF428Q96B54 MOB2-207ENST00000614710 705 ntTSL 5 BASIC31.8■■■□□ 2.68
ZNF428Q96B54 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
ZNF428Q96B54 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
ZNF428Q96B54 AC142472.1-201ENST00000612013 1741 ntBASIC31.78■■■□□ 2.68
ZNF428Q96B54 NTF6A-201ENST00000591175 560 ntBASIC31.78■■■□□ 2.68
ZNF428Q96B54 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
ZNF428Q96B54 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
ZNF428Q96B54 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
ZNF428Q96B54 HYI-213ENST00000583037 1322 ntTSL 5 BASIC31.76■■■□□ 2.68
ZNF428Q96B54 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms