Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPB3Q92617 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NPIPB3Q92617 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPB3Q92617 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.38■□□□□ 0.69
NPIPB3Q92617 WHAMMP3-201ENST00000611636 1609 ntBASIC19.38■□□□□ 0.69
NPIPB3Q92617 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPB3Q92617 AC142472.1-201ENST00000612013 1741 ntBASIC19.37■□□□□ 0.69
NPIPB3Q92617 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPB3Q92617 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPB3Q92617 DUX4L29-201ENST00000425409 679 ntBASIC19.37■□□□□ 0.69
NPIPB3Q92617 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NPIPB3Q92617 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPB3Q92617 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPB3Q92617 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.37■□□□□ 0.69
NPIPB3Q92617 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPB3Q92617 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPIPB3Q92617 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.36■□□□□ 0.69
NPIPB3Q92617 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
NPIPB3Q92617 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.36■□□□□ 0.69
NPIPB3Q92617 DUSP8P4-201ENST00000399538 1761 ntBASIC19.36■□□□□ 0.69
NPIPB3Q92617 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPB3Q92617 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.35■□□□□ 0.69
NPIPB3Q92617 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPB3Q92617 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.35■□□□□ 0.69
NPIPB3Q92617 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPB3Q92617 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPB3Q92617 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPB3Q92617 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPB3Q92617 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
NPIPB3Q92617 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPIPB3Q92617 AC020928.2-201ENST00000588717 2197 ntBASIC19.34■□□□□ 0.69
NPIPB3Q92617 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPB3Q92617 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.34■□□□□ 0.69
NPIPB3Q92617 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPB3Q92617 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPIPB3Q92617 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NPIPB3Q92617 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.33■□□□□ 0.68
NPIPB3Q92617 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.33■□□□□ 0.68
NPIPB3Q92617 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPIPB3Q92617 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.33■□□□□ 0.68
NPIPB3Q92617 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
NPIPB3Q92617 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.33■□□□□ 0.68
NPIPB3Q92617 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NPIPB3Q92617 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPB3Q92617 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.32■□□□□ 0.68
NPIPB3Q92617 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPIPB3Q92617 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NPIPB3Q92617 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPB3Q92617 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPB3Q92617 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPB3Q92617 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPB3Q92617 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.31■□□□□ 0.68
NPIPB3Q92617 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPB3Q92617 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPIPB3Q92617 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPIPB3Q92617 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.3■□□□□ 0.68
NPIPB3Q92617 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.3■□□□□ 0.68
NPIPB3Q92617 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPIPB3Q92617 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPB3Q92617 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPB3Q92617 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPB3Q92617 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPB3Q92617 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.29■□□□□ 0.68
NPIPB3Q92617 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPB3Q92617 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPB3Q92617 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NPIPB3Q92617 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.28■□□□□ 0.68
NPIPB3Q92617 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
NPIPB3Q92617 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPB3Q92617 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPB3Q92617 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPB3Q92617 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPB3Q92617 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPB3Q92617 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPB3Q92617 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.27■□□□□ 0.68
NPIPB3Q92617 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPB3Q92617 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPB3Q92617 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPB3Q92617 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPB3Q92617 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPB3Q92617 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.26■□□□□ 0.67
NPIPB3Q92617 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.26■□□□□ 0.67
NPIPB3Q92617 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPIPB3Q92617 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPIPB3Q92617 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.25■□□□□ 0.67
NPIPB3Q92617 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.25■□□□□ 0.67
NPIPB3Q92617 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NPIPB3Q92617 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPB3Q92617 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.24■□□□□ 0.67
NPIPB3Q92617 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPB3Q92617 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NPIPB3Q92617 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPB3Q92617 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPB3Q92617 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NPIPB3Q92617 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
NPIPB3Q92617 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPB3Q92617 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPB3Q92617 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPB3Q92617 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.23■□□□□ 0.67
NPIPB3Q92617 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms