Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
DDX1Q92499 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
DDX1Q92499 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
DDX1Q92499 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
DDX1Q92499 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.47■■□□□ 1.83
DDX1Q92499 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
DDX1Q92499 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
DDX1Q92499 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
DDX1Q92499 AC148477.6-201ENST00000623746 465 ntBASIC26.46■■□□□ 1.83
DDX1Q92499 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.46■■□□□ 1.83
DDX1Q92499 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
DDX1Q92499 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
DDX1Q92499 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.46■■□□□ 1.83
DDX1Q92499 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
DDX1Q92499 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
DDX1Q92499 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
DDX1Q92499 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
DDX1Q92499 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
DDX1Q92499 MIR219A2-201ENST00000608502 1504 ntBASIC26.44■■□□□ 1.82
DDX1Q92499 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
DDX1Q92499 ABHD17AP5-201ENST00000580133 923 ntBASIC26.44■■□□□ 1.82
DDX1Q92499 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.44■■□□□ 1.82
DDX1Q92499 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
DDX1Q92499 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
DDX1Q92499 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.43■■□□□ 1.82
DDX1Q92499 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
DDX1Q92499 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
DDX1Q92499 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
DDX1Q92499 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
DDX1Q92499 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
DDX1Q92499 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
DDX1Q92499 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.42■■□□□ 1.82
DDX1Q92499 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.41■■□□□ 1.82
DDX1Q92499 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.4■■□□□ 1.82
DDX1Q92499 AP004609.3-201ENST00000610705 1884 ntBASIC26.4■■□□□ 1.82
DDX1Q92499 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
DDX1Q92499 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.4■■□□□ 1.82
DDX1Q92499 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
DDX1Q92499 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
DDX1Q92499 RARRES2P2-201ENST00000394842 485 ntBASIC26.4■■□□□ 1.82
DDX1Q92499 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.4■■□□□ 1.82
DDX1Q92499 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
DDX1Q92499 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
DDX1Q92499 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
DDX1Q92499 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
DDX1Q92499 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
DDX1Q92499 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
DDX1Q92499 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
DDX1Q92499 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
DDX1Q92499 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
DDX1Q92499 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
DDX1Q92499 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.37■■□□□ 1.81
DDX1Q92499 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.37■■□□□ 1.81
DDX1Q92499 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
DDX1Q92499 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
DDX1Q92499 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
DDX1Q92499 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
DDX1Q92499 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
DDX1Q92499 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
DDX1Q92499 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
DDX1Q92499 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.35■■□□□ 1.81
DDX1Q92499 AC142472.1-201ENST00000612013 1741 ntBASIC26.35■■□□□ 1.81
DDX1Q92499 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.35■■□□□ 1.81
DDX1Q92499 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
DDX1Q92499 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.34■■□□□ 1.81
DDX1Q92499 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.34■■□□□ 1.81
DDX1Q92499 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
DDX1Q92499 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.34■■□□□ 1.81
DDX1Q92499 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.33■■□□□ 1.81
DDX1Q92499 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.33■■□□□ 1.81
DDX1Q92499 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
DDX1Q92499 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.33■■□□□ 1.81
DDX1Q92499 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
DDX1Q92499 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.33■■□□□ 1.8
DDX1Q92499 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
DDX1Q92499 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.32■■□□□ 1.8
DDX1Q92499 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.32■■□□□ 1.8
DDX1Q92499 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.31■■□□□ 1.8
DDX1Q92499 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
DDX1Q92499 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.31■■□□□ 1.8
DDX1Q92499 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
DDX1Q92499 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.31■■□□□ 1.8
DDX1Q92499 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.31■■□□□ 1.8
DDX1Q92499 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX1Q92499 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
DDX1Q92499 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
DDX1Q92499 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
DDX1Q92499 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.29■■□□□ 1.8
DDX1Q92499 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.29■■□□□ 1.8
DDX1Q92499 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX1Q92499 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
DDX1Q92499 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX1Q92499 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
DDX1Q92499 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
DDX1Q92499 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
DDX1Q92499 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
DDX1Q92499 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.28■■□□□ 1.8
DDX1Q92499 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.28■■□□□ 1.8
DDX1Q92499 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
DDX1Q92499 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms