Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PTCD2Q8WV60 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PTCD2Q8WV60 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.06■■□□□ 1.6
PTCD2Q8WV60 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.06■■□□□ 1.6
PTCD2Q8WV60 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
PTCD2Q8WV60 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.05■■□□□ 1.6
PTCD2Q8WV60 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
PTCD2Q8WV60 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.05■■□□□ 1.6
PTCD2Q8WV60 HSD17B1P1-201ENST00000590052 955 ntBASIC25.05■■□□□ 1.6
PTCD2Q8WV60 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.04■■□□□ 1.6
PTCD2Q8WV60 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.04■■□□□ 1.6
PTCD2Q8WV60 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PTCD2Q8WV60 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PTCD2Q8WV60 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
PTCD2Q8WV60 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.03■■□□□ 1.6
PTCD2Q8WV60 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PTCD2Q8WV60 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PTCD2Q8WV60 AL449106.1-201ENST00000608517 1980 ntBASIC25.02■■□□□ 1.6
PTCD2Q8WV60 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PTCD2Q8WV60 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.02■■□□□ 1.6
PTCD2Q8WV60 AC008813.1-201ENST00000536597 885 ntBASIC25.02■■□□□ 1.6
PTCD2Q8WV60 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PTCD2Q8WV60 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
PTCD2Q8WV60 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
PTCD2Q8WV60 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PTCD2Q8WV60 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PTCD2Q8WV60 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PTCD2Q8WV60 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PTCD2Q8WV60 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25■■□□□ 1.59
PTCD2Q8WV60 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25■■□□□ 1.59
PTCD2Q8WV60 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25■■□□□ 1.59
PTCD2Q8WV60 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PTCD2Q8WV60 WHAMMP3-201ENST00000611636 1609 ntBASIC25■■□□□ 1.59
PTCD2Q8WV60 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
PTCD2Q8WV60 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.98■■□□□ 1.59
PTCD2Q8WV60 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PTCD2Q8WV60 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.98■■□□□ 1.59
PTCD2Q8WV60 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PTCD2Q8WV60 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
PTCD2Q8WV60 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PTCD2Q8WV60 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
PTCD2Q8WV60 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PTCD2Q8WV60 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
PTCD2Q8WV60 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
PTCD2Q8WV60 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
PTCD2Q8WV60 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PTCD2Q8WV60 MIR219A2-201ENST00000608502 1504 ntBASIC24.95■■□□□ 1.58
PTCD2Q8WV60 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PTCD2Q8WV60 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PTCD2Q8WV60 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
PTCD2Q8WV60 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
PTCD2Q8WV60 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PTCD2Q8WV60 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
PTCD2Q8WV60 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.94■■□□□ 1.58
PTCD2Q8WV60 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.94■■□□□ 1.58
PTCD2Q8WV60 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PTCD2Q8WV60 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.94■■□□□ 1.58
PTCD2Q8WV60 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PTCD2Q8WV60 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.93■■□□□ 1.58
PTCD2Q8WV60 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.93■■□□□ 1.58
PTCD2Q8WV60 AC148477.6-201ENST00000623746 465 ntBASIC24.93■■□□□ 1.58
PTCD2Q8WV60 AP004609.3-201ENST00000610705 1884 ntBASIC24.93■■□□□ 1.58
PTCD2Q8WV60 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
PTCD2Q8WV60 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.92■■□□□ 1.58
PTCD2Q8WV60 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
PTCD2Q8WV60 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.92■■□□□ 1.58
PTCD2Q8WV60 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.92■■□□□ 1.58
PTCD2Q8WV60 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.91■■□□□ 1.58
PTCD2Q8WV60 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PTCD2Q8WV60 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
PTCD2Q8WV60 AC142472.1-201ENST00000612013 1741 ntBASIC24.91■■□□□ 1.58
PTCD2Q8WV60 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PTCD2Q8WV60 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.91■■□□□ 1.58
PTCD2Q8WV60 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.91■■□□□ 1.58
PTCD2Q8WV60 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
PTCD2Q8WV60 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
PTCD2Q8WV60 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PTCD2Q8WV60 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PTCD2Q8WV60 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PTCD2Q8WV60 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
PTCD2Q8WV60 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PTCD2Q8WV60 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
PTCD2Q8WV60 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PTCD2Q8WV60 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PTCD2Q8WV60 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PTCD2Q8WV60 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
PTCD2Q8WV60 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PTCD2Q8WV60 GPX1-201ENST00000419349 1106 ntBASIC24.89■■□□□ 1.58
PTCD2Q8WV60 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PTCD2Q8WV60 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
PTCD2Q8WV60 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.89■■□□□ 1.58
PTCD2Q8WV60 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.89■■□□□ 1.58
PTCD2Q8WV60 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.89■■□□□ 1.57
PTCD2Q8WV60 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.89■■□□□ 1.57
PTCD2Q8WV60 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
PTCD2Q8WV60 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PTCD2Q8WV60 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PTCD2Q8WV60 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PTCD2Q8WV60 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PTCD2Q8WV60 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms