Protein–RNA interactions for Protein: Q8WV19

SFT2D1, Vesicle transport protein SFT2A, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D1Q8WV19 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SFT2D1Q8WV19 DUSP8P4-201ENST00000399538 1761 ntBASIC19.82■□□□□ 0.76
SFT2D1Q8WV19 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SFT2D1Q8WV19 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SFT2D1Q8WV19 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SFT2D1Q8WV19 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SFT2D1Q8WV19 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.81■□□□□ 0.76
SFT2D1Q8WV19 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SFT2D1Q8WV19 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SFT2D1Q8WV19 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
SFT2D1Q8WV19 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SFT2D1Q8WV19 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SFT2D1Q8WV19 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.8■□□□□ 0.76
SFT2D1Q8WV19 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SFT2D1Q8WV19 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SFT2D1Q8WV19 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SFT2D1Q8WV19 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SFT2D1Q8WV19 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SFT2D1Q8WV19 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SFT2D1Q8WV19 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SFT2D1Q8WV19 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SFT2D1Q8WV19 AC092803.2-201ENST00000564287 1899 ntBASIC19.79■□□□□ 0.76
SFT2D1Q8WV19 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SFT2D1Q8WV19 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SFT2D1Q8WV19 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SFT2D1Q8WV19 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.78■□□□□ 0.76
SFT2D1Q8WV19 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SFT2D1Q8WV19 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.78■□□□□ 0.76
SFT2D1Q8WV19 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.78■□□□□ 0.76
SFT2D1Q8WV19 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SFT2D1Q8WV19 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SFT2D1Q8WV19 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SFT2D1Q8WV19 AP002414.2-202ENST00000590929 1450 ntBASIC19.77■□□□□ 0.76
SFT2D1Q8WV19 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SFT2D1Q8WV19 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.75
SFT2D1Q8WV19 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SFT2D1Q8WV19 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
SFT2D1Q8WV19 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.76■□□□□ 0.75
SFT2D1Q8WV19 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SFT2D1Q8WV19 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.76■□□□□ 0.75
SFT2D1Q8WV19 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SFT2D1Q8WV19 AC127502.1-201ENST00000399971 1502 ntBASIC19.76■□□□□ 0.75
SFT2D1Q8WV19 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SFT2D1Q8WV19 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SFT2D1Q8WV19 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SFT2D1Q8WV19 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.76■□□□□ 0.75
SFT2D1Q8WV19 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SFT2D1Q8WV19 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SFT2D1Q8WV19 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SFT2D1Q8WV19 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.75■□□□□ 0.75
SFT2D1Q8WV19 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SFT2D1Q8WV19 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SFT2D1Q8WV19 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SFT2D1Q8WV19 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SFT2D1Q8WV19 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SFT2D1Q8WV19 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SFT2D1Q8WV19 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SFT2D1Q8WV19 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.73■□□□□ 0.75
SFT2D1Q8WV19 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SFT2D1Q8WV19 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SFT2D1Q8WV19 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.73■□□□□ 0.75
SFT2D1Q8WV19 AL031258.1-201ENST00000623562 325 ntBASIC19.73■□□□□ 0.75
SFT2D1Q8WV19 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SFT2D1Q8WV19 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SFT2D1Q8WV19 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SFT2D1Q8WV19 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SFT2D1Q8WV19 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SFT2D1Q8WV19 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SFT2D1Q8WV19 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SFT2D1Q8WV19 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SFT2D1Q8WV19 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SFT2D1Q8WV19 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SFT2D1Q8WV19 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SFT2D1Q8WV19 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SFT2D1Q8WV19 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SFT2D1Q8WV19 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SFT2D1Q8WV19 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SFT2D1Q8WV19 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
SFT2D1Q8WV19 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SFT2D1Q8WV19 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.69■□□□□ 0.74
SFT2D1Q8WV19 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SFT2D1Q8WV19 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SFT2D1Q8WV19 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SFT2D1Q8WV19 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SFT2D1Q8WV19 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SFT2D1Q8WV19 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SFT2D1Q8WV19 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SFT2D1Q8WV19 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SFT2D1Q8WV19 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SFT2D1Q8WV19 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
SFT2D1Q8WV19 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SFT2D1Q8WV19 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.65■□□□□ 0.74
SFT2D1Q8WV19 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SFT2D1Q8WV19 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SFT2D1Q8WV19 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.65■□□□□ 0.74
SFT2D1Q8WV19 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SFT2D1Q8WV19 ERN1-208ENST00000606895 2068 ntBASIC19.64■□□□□ 0.74
SFT2D1Q8WV19 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SFT2D1Q8WV19 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SFT2D1Q8WV19 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms