Protein–RNA interactions for Protein: Q8VH31

Rfpl4a, Ret finger protein-like 4A, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfpl4aQ8VH31 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rfpl4aQ8VH31 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Rfpl4aQ8VH31 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rfpl4aQ8VH31 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rfpl4aQ8VH31 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Rfpl4aQ8VH31 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Rfpl4aQ8VH31 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rfpl4aQ8VH31 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rfpl4aQ8VH31 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rfpl4aQ8VH31 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rfpl4aQ8VH31 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rfpl4aQ8VH31 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rfpl4aQ8VH31 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Rfpl4aQ8VH31 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rfpl4aQ8VH31 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rfpl4aQ8VH31 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rfpl4aQ8VH31 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rfpl4aQ8VH31 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rfpl4aQ8VH31 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rfpl4aQ8VH31 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.42■■□□□ 1.02
Rfpl4aQ8VH31 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.42■■□□□ 1.02
Rfpl4aQ8VH31 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Rfpl4aQ8VH31 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rfpl4aQ8VH31 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rfpl4aQ8VH31 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rfpl4aQ8VH31 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.4■■□□□ 1.02
Rfpl4aQ8VH31 Gm43566-201ENSMUST00000196851 808 ntBASIC21.4■■□□□ 1.02
Rfpl4aQ8VH31 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.4■■□□□ 1.02
Rfpl4aQ8VH31 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rfpl4aQ8VH31 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rfpl4aQ8VH31 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rfpl4aQ8VH31 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rfpl4aQ8VH31 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rfpl4aQ8VH31 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.39■■□□□ 1.01
Rfpl4aQ8VH31 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
Rfpl4aQ8VH31 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rfpl4aQ8VH31 Gm13238-201ENSMUST00000117655 780 ntBASIC21.39■■□□□ 1.01
Rfpl4aQ8VH31 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rfpl4aQ8VH31 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rfpl4aQ8VH31 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rfpl4aQ8VH31 Gm22567-201ENSMUST00000175542 342 ntBASIC21.38■■□□□ 1.01
Rfpl4aQ8VH31 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rfpl4aQ8VH31 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Rfpl4aQ8VH31 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rfpl4aQ8VH31 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.38■■□□□ 1.01
Rfpl4aQ8VH31 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rfpl4aQ8VH31 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.37■■□□□ 1.01
Rfpl4aQ8VH31 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.37■■□□□ 1.01
Rfpl4aQ8VH31 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.37■■□□□ 1.01
Rfpl4aQ8VH31 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rfpl4aQ8VH31 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rfpl4aQ8VH31 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Rfpl4aQ8VH31 Gm45444-201ENSMUST00000211394 898 ntBASIC21.36■■□□□ 1.01
Rfpl4aQ8VH31 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rfpl4aQ8VH31 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rfpl4aQ8VH31 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rfpl4aQ8VH31 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Rfpl4aQ8VH31 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.35■■□□□ 1.01
Rfpl4aQ8VH31 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rfpl4aQ8VH31 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Rfpl4aQ8VH31 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rfpl4aQ8VH31 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.34■■□□□ 1.01
Rfpl4aQ8VH31 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.34■■□□□ 1.01
Rfpl4aQ8VH31 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rfpl4aQ8VH31 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Rfpl4aQ8VH31 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.32■■□□□ 1
Rfpl4aQ8VH31 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.32■■□□□ 1
Rfpl4aQ8VH31 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfpl4aQ8VH31 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.32■■□□□ 1
Rfpl4aQ8VH31 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.32■■□□□ 1
Rfpl4aQ8VH31 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfpl4aQ8VH31 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.32■■□□□ 1
Rfpl4aQ8VH31 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfpl4aQ8VH31 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfpl4aQ8VH31 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfpl4aQ8VH31 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rfpl4aQ8VH31 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rfpl4aQ8VH31 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Rfpl4aQ8VH31 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Rfpl4aQ8VH31 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Rfpl4aQ8VH31 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rfpl4aQ8VH31 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.3■■□□□ 1
Rfpl4aQ8VH31 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.3■■□□□ 1
Rfpl4aQ8VH31 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rfpl4aQ8VH31 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rfpl4aQ8VH31 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rfpl4aQ8VH31 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rfpl4aQ8VH31 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rfpl4aQ8VH31 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Rfpl4aQ8VH31 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rfpl4aQ8VH31 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Rfpl4aQ8VH31 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rfpl4aQ8VH31 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rfpl4aQ8VH31 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rfpl4aQ8VH31 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Rfpl4aQ8VH31 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfpl4aQ8VH31 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rfpl4aQ8VH31 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfpl4aQ8VH31 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rfpl4aQ8VH31 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 110 ms