Protein–RNA interactions for Protein: Q8VE09

Ttc39c, Tetratricopeptide repeat protein 39C, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39cQ8VE09 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ttc39cQ8VE09 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ttc39cQ8VE09 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ttc39cQ8VE09 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ttc39cQ8VE09 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ttc39cQ8VE09 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ttc39cQ8VE09 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ttc39cQ8VE09 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ttc39cQ8VE09 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ttc39cQ8VE09 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ttc39cQ8VE09 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.16■■□□□ 1.3
Ttc39cQ8VE09 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Ttc39cQ8VE09 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.16■■□□□ 1.3
Ttc39cQ8VE09 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.16■■□□□ 1.3
Ttc39cQ8VE09 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ttc39cQ8VE09 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ttc39cQ8VE09 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ttc39cQ8VE09 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ttc39cQ8VE09 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ttc39cQ8VE09 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Ttc39cQ8VE09 Gm14523-201ENSMUST00000117260 558 ntBASIC23.15■■□□□ 1.3
Ttc39cQ8VE09 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ttc39cQ8VE09 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ttc39cQ8VE09 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ttc39cQ8VE09 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ttc39cQ8VE09 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ttc39cQ8VE09 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ttc39cQ8VE09 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ttc39cQ8VE09 Gm7332-201ENSMUST00000118351 454 ntBASIC23.13■■□□□ 1.29
Ttc39cQ8VE09 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ttc39cQ8VE09 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Ttc39cQ8VE09 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ttc39cQ8VE09 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ttc39cQ8VE09 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.11■■□□□ 1.29
Ttc39cQ8VE09 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ttc39cQ8VE09 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
Ttc39cQ8VE09 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ttc39cQ8VE09 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ttc39cQ8VE09 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.1■■□□□ 1.29
Ttc39cQ8VE09 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ttc39cQ8VE09 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ttc39cQ8VE09 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.09■■□□□ 1.29
Ttc39cQ8VE09 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.09■■□□□ 1.29
Ttc39cQ8VE09 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.09■■□□□ 1.29
Ttc39cQ8VE09 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ttc39cQ8VE09 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ttc39cQ8VE09 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.08■■□□□ 1.28
Ttc39cQ8VE09 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ttc39cQ8VE09 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ttc39cQ8VE09 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ttc39cQ8VE09 Gm44428-201ENSMUST00000204474 874 ntBASIC23.07■■□□□ 1.28
Ttc39cQ8VE09 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ttc39cQ8VE09 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ttc39cQ8VE09 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ttc39cQ8VE09 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
Ttc39cQ8VE09 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ttc39cQ8VE09 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Ttc39cQ8VE09 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.06■■□□□ 1.28
Ttc39cQ8VE09 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Ttc39cQ8VE09 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ttc39cQ8VE09 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ttc39cQ8VE09 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ttc39cQ8VE09 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ttc39cQ8VE09 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ttc39cQ8VE09 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Ttc39cQ8VE09 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.04■■□□□ 1.28
Ttc39cQ8VE09 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ttc39cQ8VE09 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ttc39cQ8VE09 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ttc39cQ8VE09 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ttc39cQ8VE09 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Ttc39cQ8VE09 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Ttc39cQ8VE09 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.03■■□□□ 1.28
Ttc39cQ8VE09 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Ttc39cQ8VE09 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.02■■□□□ 1.28
Ttc39cQ8VE09 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ttc39cQ8VE09 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ttc39cQ8VE09 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ttc39cQ8VE09 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ttc39cQ8VE09 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ttc39cQ8VE09 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.01■■□□□ 1.27
Ttc39cQ8VE09 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ttc39cQ8VE09 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Ttc39cQ8VE09 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ttc39cQ8VE09 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Ttc39cQ8VE09 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23■■□□□ 1.27
Ttc39cQ8VE09 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ttc39cQ8VE09 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ttc39cQ8VE09 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ttc39cQ8VE09 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ttc39cQ8VE09 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.98■■□□□ 1.27
Ttc39cQ8VE09 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ttc39cQ8VE09 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.97■■□□□ 1.27
Ttc39cQ8VE09 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ttc39cQ8VE09 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.97■■□□□ 1.27
Ttc39cQ8VE09 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ttc39cQ8VE09 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.96■■□□□ 1.27
Ttc39cQ8VE09 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ttc39cQ8VE09 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ttc39cQ8VE09 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.96■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms