Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SHKBP1Q8TBC3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SHKBP1Q8TBC3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
SHKBP1Q8TBC3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SHKBP1Q8TBC3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SHKBP1Q8TBC3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SHKBP1Q8TBC3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.09■■□□□ 1.77
SHKBP1Q8TBC3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
SHKBP1Q8TBC3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SHKBP1Q8TBC3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.08■■□□□ 1.77
SHKBP1Q8TBC3 AL592293.1-201ENST00000502889 1188 ntBASIC26.08■■□□□ 1.77
SHKBP1Q8TBC3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SHKBP1Q8TBC3 AC025884.2-201ENST00000553429 711 ntBASIC26.08■■□□□ 1.77
SHKBP1Q8TBC3 AC133552.2-201ENST00000619106 1032 ntBASIC26.08■■□□□ 1.77
SHKBP1Q8TBC3 AC129492.7-201ENST00000622992 756 ntBASIC26.08■■□□□ 1.77
SHKBP1Q8TBC3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SHKBP1Q8TBC3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SHKBP1Q8TBC3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.07■■□□□ 1.76
SHKBP1Q8TBC3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SHKBP1Q8TBC3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
SHKBP1Q8TBC3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.07■■□□□ 1.76
SHKBP1Q8TBC3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.07■■□□□ 1.76
SHKBP1Q8TBC3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.06■■□□□ 1.76
SHKBP1Q8TBC3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SHKBP1Q8TBC3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.06■■□□□ 1.76
SHKBP1Q8TBC3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.06■■□□□ 1.76
SHKBP1Q8TBC3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
SHKBP1Q8TBC3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SHKBP1Q8TBC3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SHKBP1Q8TBC3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SHKBP1Q8TBC3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SHKBP1Q8TBC3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.05■■□□□ 1.76
SHKBP1Q8TBC3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.04■■□□□ 1.76
SHKBP1Q8TBC3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SHKBP1Q8TBC3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SHKBP1Q8TBC3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
SHKBP1Q8TBC3 AC026202.3-201ENST00000600805 1127 ntBASIC26.03■■□□□ 1.76
SHKBP1Q8TBC3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
SHKBP1Q8TBC3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
SHKBP1Q8TBC3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
SHKBP1Q8TBC3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SHKBP1Q8TBC3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
SHKBP1Q8TBC3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SHKBP1Q8TBC3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
SHKBP1Q8TBC3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SHKBP1Q8TBC3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
SHKBP1Q8TBC3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
SHKBP1Q8TBC3 DUX4L18-201ENST00000553347 1267 ntBASIC26■■□□□ 1.75
SHKBP1Q8TBC3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SHKBP1Q8TBC3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.99■■□□□ 1.75
SHKBP1Q8TBC3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SHKBP1Q8TBC3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.99■■□□□ 1.75
SHKBP1Q8TBC3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
SHKBP1Q8TBC3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SHKBP1Q8TBC3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SHKBP1Q8TBC3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.98■■□□□ 1.75
SHKBP1Q8TBC3 RP9P-202ENST00000450133 1212 ntBASIC25.98■■□□□ 1.75
SHKBP1Q8TBC3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
SHKBP1Q8TBC3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.97■■□□□ 1.75
SHKBP1Q8TBC3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.97■■□□□ 1.75
SHKBP1Q8TBC3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.96■■□□□ 1.75
SHKBP1Q8TBC3 RARRES2P1-201ENST00000474487 481 ntBASIC25.96■■□□□ 1.75
SHKBP1Q8TBC3 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.96■■□□□ 1.75
SHKBP1Q8TBC3 AC093536.1-201ENST00000569153 554 ntBASIC25.96■■□□□ 1.75
SHKBP1Q8TBC3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SHKBP1Q8TBC3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SHKBP1Q8TBC3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
SHKBP1Q8TBC3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
SHKBP1Q8TBC3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SHKBP1Q8TBC3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SHKBP1Q8TBC3 RAP2CP1-202ENST00000605179 643 ntBASIC25.94■■□□□ 1.74
SHKBP1Q8TBC3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
SHKBP1Q8TBC3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.93■■□□□ 1.74
SHKBP1Q8TBC3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SHKBP1Q8TBC3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.93■■□□□ 1.74
SHKBP1Q8TBC3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
SHKBP1Q8TBC3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.93■■□□□ 1.74
SHKBP1Q8TBC3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SHKBP1Q8TBC3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.92■■□□□ 1.74
SHKBP1Q8TBC3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.92■■□□□ 1.74
SHKBP1Q8TBC3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.92■■□□□ 1.74
SHKBP1Q8TBC3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.91■■□□□ 1.74
SHKBP1Q8TBC3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
SHKBP1Q8TBC3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.91■■□□□ 1.74
SHKBP1Q8TBC3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SHKBP1Q8TBC3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
SHKBP1Q8TBC3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
SHKBP1Q8TBC3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.9■■□□□ 1.74
SHKBP1Q8TBC3 DUX4L9-201ENST00000449051 1259 ntBASIC25.9■■□□□ 1.74
SHKBP1Q8TBC3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SHKBP1Q8TBC3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SHKBP1Q8TBC3 MIR3960-201ENST00000583311 91 ntBASIC25.89■■□□□ 1.74
SHKBP1Q8TBC3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SHKBP1Q8TBC3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SHKBP1Q8TBC3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
SHKBP1Q8TBC3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
SHKBP1Q8TBC3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SHKBP1Q8TBC3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
SHKBP1Q8TBC3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SHKBP1Q8TBC3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms